Genomic map of Streptococcus phage IPP12 (KY065454)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065454
Definition
Streptococcus phage IPP12, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
34428
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
40.25
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD21838.1 KY065454_p30 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 11538 11681
APD21857.1 KY065454_p49 hypothetical protein phrog_33 distal tail protein Dit tail 1 24849 25571
APD21832.1 KY065454_p24 hypothetical protein phrog_834 unknown function unknown function 1 9665 9994
APD21842.1 KY065454_p34 nuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13519 13824
APD21865.1 KY065454_p57 lytic amidase phrog_1110 endolysin lysis 1 33472 34428
APD21836.1 KY065454_p28 hypothetical protein phrog_98 unknown function unknown function 1 10920 11309
APD21847.1 KY065454_p39 prohead protease phrog_80 head maturation protease head and packaging 1 17514 18089
APD21825.1 KY065454_p17 hypothetical protein phrog_2108 unknown function unknown function 1 7845 8003
APD21852.1 KY065454_p44 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20127 20474
APD21817.1 KY065454_p9 hypothetical protein phrog_3168 unknown function unknown function 1 4493 4690
APD21823.1 KY065454_p15 hypothetical protein phrog_1555 unknown function unknown function 1 6741 7037
APD21841.1 KY065454_p33 hypothetical protein phrog_5627 unknown function unknown function 1 13208 13399
APD21860.1 KY065454_p52 hypothetical protein phrog_4793 unknown function unknown function 1 32054 32170
APD21856.1 KY065454_p48 tail tape measure protein phrog_58 tail length tape measure protein tail 1 22093 24852
APD21811.1 KY065454_p3 plasmid stabilization system protein phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover -1 2567 2830
APD21815.1 KY065454_p7 hypothetical protein phrog_709 unknown function unknown function 1 3906 4280
APD21853.1 KY065454_p45 hypothetical protein phrog_78 tail terminator connector 1 20471 20794
APD21818.1 KY065454_p10 hypothetical protein phrog_2798 unknown function unknown function 1 4701 4862
APD21850.1 KY065454_p42 hypothetical protein phrog_2550 unknown function unknown function 1 19563 19844
APD21830.1 KY065454_p22 hypothetical protein phrog_1681 unknown function unknown function 1 9330 9497
APD21819.1 KY065454_p11 hypothetical protein phrog_2542 unknown function unknown function -1 4857 5282
APD21816.1 KY065454_p8 DNA binding protein phrog_1468 transcriptional repressor transcription regulation 1 4273 4476
APD21839.1 KY065454_p31 transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 11912 12313
APD21835.1 KY065454_p27 DNA N-4 cytosine methyltransferase phrog_6151 DNA methyltransferase other 1 10570 10923
APD21809.1 KY065454_p1 integrase phrog_1 integrase integration and excision -1 1 1149
APD21814.1 KY065454_p6 hypothetical protein phrog_4791 unknown function unknown function 1 3716 3862
APD21833.1 KY065454_p25 hypothetical protein phrog_121 unknown function unknown function 1 9984 10409
APD21851.1 KY065454_p43 head-tail adaptor phrog_1951 head-tail adaptor connector 1 19831 20130
APD21848.1 KY065454_p40 major capsid protein phrog_10 major head protein head and packaging 1 18086 19258
APD21810.1 KY065454_p2 hypothetical protein phrog_4654 unknown function unknown function -1 1324 2136
APD21834.1 KY065454_p26 DNA N-4 cytosine methyltransferase phrog_7811 methyltransferase other 1 10409 10534
APD21813.1 KY065454_p5 transcriptional regulator, Cro/CI family phrog_8 transcriptional regulator transcription regulation -1 3063 3431
APD21820.1 KY065454_p12 hypothetical protein phrog_463 anti-repressor transcription regulation 1 5336 6049
APD21829.1 KY065454_p21 hypothetical protein phrog_5262 unknown function unknown function 1 9196 9300
APD21859.1 KY065454_p51 PblB phrog_1330 tail protein tail 1 28839 32057
APD21864.1 KY065454_p56 LL-H family holin phrog_608 holin lysis 1 33137 33472
APD21837.1 KY065454_p29 hypothetical protein phrog_236 nucleotide kinase other 1 11309 11545
APD21858.1 KY065454_p50 host specificity protein phrog_1210 PblB-type receptor binding other 1 25572 28793
APD21831.1 KY065454_p23 hypothetical protein phrog_1638 unknown function unknown function 1 9484 9693
APD21854.1 KY065454_p46 hypothetical protein phrog_88 major tail protein tail 1 20806 21384
APD21828.1 KY065454_p20 hypothetical protein phrog_1174 unknown function unknown function 1 8976 9203
APD21822.1 KY065454_p14 lipoprotein phrog_1490 lipoprotein other 1 6405 6725
APD21840.1 KY065454_p32 site-specific recombinase phrog_216 integrase integration and excision 1 12502 13044
APD21827.1 KY065454_p19 hypothetical protein phrog_1580 unknown function unknown function 1 8782 8976
APD21844.1 KY065454_p36 terminase large subunit phrog_9 terminase large subunit head and packaging 1 14354 16084
APD21846.1 KY065454_p38 portal protein phrog_12 portal protein head and packaging 1 16328 17530
APD21849.1 KY065454_p41 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 19270 19560
APD21855.1 KY065454_p47 hypothetical protein phrog_709 unknown function unknown function 1 21396 21815
APD21843.1 KY065454_p35 terminase small subunit phrog_361 terminase small subunit head and packaging 1 13969 14361
APD21826.1 KY065454_p18 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 7997 8767
APD21812.1 KY065454_p4 hypothetical protein phrog_4085 unknown function unknown function -1 2830 3063
APD21845.1 KY065454_p37 hypothetical protein phrog_2955 unknown function unknown function 1 16092 16310
APD21821.1 KY065454_p13 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 6062 6319
APD21862.1 KY065454_p54 hypothetical protein phrog_1164 unknown function unknown function 1 32357 32707
APD21861.1 KY065454_p53 hypothetical protein phrog_1137 unknown function unknown function 1 32151 32354
APD21824.1 KY065454_p16 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 7021 7857
APD21863.1 KY065454_p55 holin 1 phrog_199 holin lysis 1 32717 33133