| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065455 |
Definition |
Streptococcus phage IPP14, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
37252 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
38.44 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD21914.1 | KY065455_p49 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 36296 | 37252 |
| APD21887.1 | KY065455_p22 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 11452 | 11973 |
| APD21895.1 | KY065455_p30 | hypothetical protein | phrog_3755 | unknown function | unknown function | 1 | 18039 | 18245 |
| APD21876.1 | KY065455_p11 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 5892 | 6884 |
| APD21875.1 | KY065455_p10 | single-strand DNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5188 | 5889 |
| APD21878.1 | KY065455_p13 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7072 | 7617 |
| APD21869.1 | KY065455_p4 | repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2180 | 2536 |
| APD21911.1 | KY065455_p46 | hypothetical protein | phrog_2566 | unknown function | unknown function | 1 | 35261 | 35530 |
| APD21907.1 | KY065455_p42 | hypothetical protein | phrog_1686 | tail length tape measure protein | tail | 1 | 24427 | 27708 |
| APD21866.1 | KY065455_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1122 |
| APD21891.1 | KY065455_p26 | hypothetical protein | phrog_5057 | unknown function | unknown function | 1 | 13799 | 14545 |
| APD21901.1 | KY065455_p36 | minor capsid protein 2 | phrog_793 | head-tail adaptor | connector | 1 | 21709 | 22101 |
| APD21886.1 | KY065455_p21 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 11148 | 11465 |
| APD21912.1 | KY065455_p47 | holin 1 | phrog_199 | holin | lysis | 1 | 35627 | 35956 |
| APD21909.1 | KY065455_p44 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 29200 | 33147 |
| APD21902.1 | KY065455_p37 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 22101 | 22445 |
| APD21898.1 | KY065455_p33 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 20159 | 21040 |
| APD21873.1 | KY065455_p8 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4381 | 4647 |
| APD21883.1 | KY065455_p18 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 10267 | 10479 |
| APD21904.1 | KY065455_p39 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 22849 | 23298 |
| APD21906.1 | KY065455_p41 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 23871 | 24434 |
| APD21899.1 | KY065455_p34 | hypothetical protein | phrog_2910 | unknown function | unknown function | 1 | 21051 | 21284 |
| APD21908.1 | KY065455_p43 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 27705 | 29219 |
| APD21892.1 | KY065455_p27 | hypothetical protein | phrog_2412 | unknown function | unknown function | 1 | 14731 | 15204 |
| APD21877.1 | KY065455_p12 | hypothetical protein | phrog_4139 | unknown function | unknown function | 1 | 6906 | 7082 |
| APD21903.1 | KY065455_p38 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 22445 | 22852 |
| APD21879.1 | KY065455_p14 | type II DNA modification methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 7643 | 8776 |
| APD21893.1 | KY065455_p28 | PBSX family terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 15269 | 16504 |
| APD21871.1 | KY065455_p6 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 2999 | 3697 |
| APD21884.1 | KY065455_p19 | holliday junction resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10541 | 10891 |
| APD21910.1 | KY065455_p45 | structural protein | phrog_372 | tail protein | tail | 1 | 33159 | 35207 |
| APD21870.1 | KY065455_p5 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2803 | 2997 |
| APD21872.1 | KY065455_p7 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3883 | 4224 |
| APD21868.1 | KY065455_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1778 | 2158 |
| APD21888.1 | KY065455_p23 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 11973 | 12266 |
| APD21885.1 | KY065455_p20 | hypothetical protein | phrog_4706 | unknown function | unknown function | 1 | 10893 | 11099 |
| APD21894.1 | KY065455_p29 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 16568 | 18085 |
| APD21874.1 | KY065455_p9 | hypothetical protein | phrog_2715 | unknown function | unknown function | 1 | 4730 | 5182 |
| APD21896.1 | KY065455_p31 | minor capsid protein 2 | phrog_581 | minor head protein | head and packaging | 1 | 18288 | 19439 |
| APD21913.1 | KY065455_p48 | LL-H family holin | phrog_608 | holin | lysis | 1 | 35960 | 36292 |
| APD21880.1 | KY065455_p15 | hypothetical protein | phrog_3947 | unknown function | unknown function | 1 | 8799 | 9023 |
| APD21897.1 | KY065455_p32 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 19578 | 20141 |
| APD21882.1 | KY065455_p17 | hypothetical protein | phrog_1029 | unknown function | unknown function | 1 | 9513 | 10250 |
| APD21889.1 | KY065455_p24 | hypothetical protein | phrog_3511 | unknown function | unknown function | 1 | 12266 | 12658 |
| APD21905.1 | KY065455_p40 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 23363 | 23851 |
| APD21890.1 | KY065455_p25 | ParB-like protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 12724 | 13818 |
| APD21900.1 | KY065455_p35 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 21327 | 21719 |
| APD21867.1 | KY065455_p2 | hypothetical protein | phrog_5214 | unknown function | unknown function | -1 | 1245 | 1760 |
| APD21881.1 | KY065455_p16 | hypothetical protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | 1 | 9077 | 9511 |