| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065456 |
Definition |
Streptococcus phage IPP15, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
38083 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
40.25 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD21962.1 | KY065456_p48 | TMP repeat family protein | phrog_1535 | tail length tape measure protein | tail | 1 | 25476 | 29081 |
| APD21930.1 | KY065456_p16 | C-5 cytosine-specific DNA methylase | phrog_2882 | DNA methyltransferase | other | 1 | 9113 | 9880 |
| APD21922.1 | KY065456_p8 | hypothetical protein | phrog_13947 | unknown function | unknown function | 1 | 5061 | 5585 |
| APD21954.1 | KY065456_p40 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 22624 | 22812 |
| APD21960.1 | KY065456_p46 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 24720 | 25100 |
| APD21952.1 | KY065456_p38 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 21051 | 21566 |
| APD21959.1 | KY065456_p45 | major tail protein | phrog_158 | major tail protein | tail | 1 | 24302 | 24715 |
| APD21965.1 | KY065456_p51 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 35923 | 36126 |
| APD21942.1 | KY065456_p28 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 13866 | 14306 |
| APD21946.1 | KY065456_p32 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 16027 | 17325 |
| APD21945.1 | KY065456_p31 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 15609 | 16049 |
| APD21934.1 | KY065456_p20 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 11314 | 11526 |
| APD21955.1 | KY065456_p41 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 22814 | 23125 |
| APD21944.1 | KY065456_p30 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 14737 | 15141 |
| APD21941.1 | KY065456_p27 | hypothetical protein | phrog_2131 | unknown function | unknown function | 1 | 13432 | 13854 |
| APD21949.1 | KY065456_p35 | RimM protein | phrog_15041 | unknown function | unknown function | 1 | 20106 | 20333 |
| APD21964.1 | KY065456_p50 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 29445 | 35828 |
| APD21953.1 | KY065456_p39 | carbohydrate-binding family V/XII protein | phrog_422 | major head protein | head and packaging | 1 | 21589 | 22614 |
| APD21967.1 | KY065456_p53 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 36488 | 36787 |
| APD21968.1 | KY065456_p54 | LL-H family holin | phrog_608 | holin | lysis | 1 | 36791 | 37123 |
| APD21918.1 | KY065456_p4 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3245 | 3457 |
| APD21936.1 | KY065456_p22 | hypothetical protein | phrog_4706 | unknown function | unknown function | 1 | 11940 | 12146 |
| APD21957.1 | KY065456_p43 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 23419 | 23934 |
| APD21931.1 | KY065456_p17 | hypothetical protein | phrog_3947 | unknown function | unknown function | 1 | 9867 | 10070 |
| APD21938.1 | KY065456_p24 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 12514 | 13017 |
| APD21933.1 | KY065456_p19 | hypothetical protein | phrog_1029 | unknown function | unknown function | 1 | 10560 | 11297 |
| APD21939.1 | KY065456_p25 | hypothetical protein | phrog_4252 | unknown function | unknown function | 1 | 13017 | 13178 |
| APD21927.1 | KY065456_p13 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7979 | 8554 |
| APD21937.1 | KY065456_p23 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 12198 | 12512 |
| APD21958.1 | KY065456_p44 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 23931 | 24299 |
| APD21929.1 | KY065456_p15 | hypothetical protein | phrog_8736 | unknown function | unknown function | 1 | 8796 | 9074 |
| APD21961.1 | KY065456_p47 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 25139 | 25489 |
| APD21919.1 | KY065456_p5 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 3510 | 4226 |
| APD21924.1 | KY065456_p10 | single-strand DNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6095 | 6796 |
| APD21917.1 | KY065456_p3 | repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2349 | 3080 |
| APD21928.1 | KY065456_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8567 | 8815 |
| APD21916.1 | KY065456_p2 | hypothetical protein | phrog_19811 | unknown function | unknown function | -1 | 1584 | 2306 |
| APD21915.1 | KY065456_p1 | site-specific recombinase/resolvase | phrog_95 | integrase | integration and excision | -1 | 1 | 1446 |
| APD21935.1 | KY065456_p21 | holliday junction resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 11537 | 11938 |
| APD21921.1 | KY065456_p7 | DNA-binding helix-turn-helix protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4509 | 4820 |
| APD21923.1 | KY065456_p9 | hypothetical protein | phrog_2715 | unknown function | unknown function | 1 | 5637 | 6089 |
| APD21920.1 | KY065456_p6 | hypothetical protein | phrog_3624 | unknown function | unknown function | 1 | 4299 | 4457 |
| APD21969.1 | KY065456_p55 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 37127 | 38083 |
| APD21932.1 | KY065456_p18 | hypothetical protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | 1 | 10124 | 10558 |
| APD21926.1 | KY065456_p12 | hypothetical protein | phrog_4139 | unknown function | unknown function | 1 | 7813 | 7989 |
| APD21951.1 | KY065456_p37 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 20632 | 20883 |
| APD21925.1 | KY065456_p11 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 6799 | 7791 |
| APD21947.1 | KY065456_p33 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 17337 | 18806 |
| APD21956.1 | KY065456_p42 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 23106 | 23444 |
| APD21950.1 | KY065456_p36 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 20385 | 20630 |
| APD21963.1 | KY065456_p49 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 29090 | 29440 |
| APD21966.1 | KY065456_p52 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 36129 | 36479 |
| APD21940.1 | KY065456_p26 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 13175 | 13435 |
| APD21948.1 | KY065456_p34 | head morphogenesis protein | phrog_115 | minor head protein | head and packaging | 1 | 18769 | 20118 |
| APD21943.1 | KY065456_p29 | hypothetical protein | phrog_6716 | unknown function | unknown function | 1 | 14303 | 14617 |