| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065457 |
Definition |
Streptococcus phage IPP16, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
34329 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
37.51 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22006.1 | KY065457_p37 | hypothetical protein | phrog_595 | head maturation protease | head and packaging | 1 | 19352 | 20932 |
| APD21998.1 | KY065457_p29 | type I restriction-modification system, DNA-methyltransferase subunit M | phrog_6380 | DNA methyltransferase | other | 1 | 13003 | 14238 |
| APD21974.1 | KY065457_p5 | hypothetical protein | phrog_20440 | unknown function | unknown function | 1 | 3882 | 4166 |
| APD22004.1 | KY065457_p35 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 16523 | 17911 |
| APD22017.1 | KY065457_p48 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 25801 | 26010 |
| APD22020.1 | KY065457_p51 | endolysin | phrog_3558 | tail protein | tail | 1 | 29346 | 30698 |
| APD21973.1 | KY065457_p4 | transcriptional repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2995 | 3723 |
| APD21997.1 | KY065457_p28 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 12795 | 12983 |
| APD21994.1 | KY065457_p25 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 11787 | 12119 |
| APD22010.1 | KY065457_p41 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 22778 | 23005 |
| APD22018.1 | KY065457_p49 | tail tape measure protein | phrog_991 | tail length tape measure protein | tail | 1 | 26015 | 28636 |
| APD21993.1 | KY065457_p24 | hypothetical protein | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 10813 | 11643 |
| APD21970.1 | KY065457_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1143 |
| APD22007.1 | KY065457_p38 | hypothetical protein | phrog_11404 | unknown function | unknown function | 1 | 20938 | 21129 |
| APD21989.1 | KY065457_p20 | hypothetical protein | phrog_3819 | unknown function | unknown function | 1 | 9006 | 9275 |
| APD21987.1 | KY065457_p18 | excisionase | phrog_904 | excisionase | integration and excision | 1 | 8493 | 8804 |
| APD22015.1 | KY065457_p46 | hypothetical protein | phrog_885 | major tail protein | tail | 1 | 24650 | 25267 |
| APD22008.1 | KY065457_p39 | scaffolding protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 21292 | 21831 |
| APD22001.1 | KY065457_p32 | membrane protein | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 14858 | 15169 |
| APD21981.1 | KY065457_p12 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 6323 | 6676 |
| APD21995.1 | KY065457_p26 | hypothetical protein | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 12116 | 12631 |
| APD22019.1 | KY065457_p50 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28630 | 29346 |
| APD21986.1 | KY065457_p17 | XRE family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 8223 | 8411 |
| APD22012.1 | KY065457_p43 | hypothetical protein | phrog_1059 | head-tail adaptor | connector | 1 | 23568 | 23873 |
| APD21982.1 | KY065457_p13 | hypothetical protein | phrog_4488 | unknown function | unknown function | 1 | 6814 | 6945 |
| APD21991.1 | KY065457_p22 | hypothetical protein | phrog_8688 | unknown function | unknown function | 1 | 9591 | 9824 |
| APD21978.1 | KY065457_p9 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 5501 | 5704 |
| APD21996.1 | KY065457_p27 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 12643 | 12795 |
| APD22023.1 | KY065457_p54 | hypothetical protein | phrog_297 | holin | lysis | 1 | 33037 | 33315 |
| APD22021.1 | KY065457_p52 | hypothetical protein | phrog_24388 | unknown function | unknown function | 1 | 30699 | 32723 |
| APD22009.1 | KY065457_p40 | major capsid protein | phrog_422 | major head protein | head and packaging | 1 | 21850 | 22767 |
| APD21999.1 | KY065457_p30 | hypothetical protein | phrog_2668 | unknown function | unknown function | 1 | 14232 | 14663 |
| APD21975.1 | KY065457_p6 | hypothetical protein | phrog_5570 | unknown function | unknown function | 1 | 4228 | 4503 |
| APD21972.1 | KY065457_p3 | hypothetical protein | phrog_29766 | unknown function | unknown function | -1 | 2476 | 2925 |
| APD22016.1 | KY065457_p47 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 25277 | 25705 |
| APD21988.1 | KY065457_p19 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 8807 | 9013 |
| APD21984.1 | KY065457_p15 | hypothetical protein | phrog_4621 | unknown function | unknown function | 1 | 7639 | 7827 |
| APD21979.1 | KY065457_p10 | hypothetical protein | phrog_7728 | unknown function | unknown function | -1 | 5661 | 5852 |
| APD22024.1 | KY065457_p55 | lysin | phrog_6745 | endolysin | lysis | 1 | 33325 | 34329 |
| APD21983.1 | KY065457_p14 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 6896 | 7585 |
| APD21985.1 | KY065457_p16 | hypothetical protein | phrog_3292 | unknown function | unknown function | -1 | 7824 | 8024 |
| APD22005.1 | KY065457_p36 | serine protein kinase | phrog_64 | portal protein | head and packaging | 1 | 17920 | 19407 |
| APD22003.1 | KY065457_p34 | HNH endonuclease | phrog_4102 | terminase small subunit | head and packaging | 1 | 16132 | 16530 |
| APD21980.1 | KY065457_p11 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 5925 | 6161 |
| APD21977.1 | KY065457_p8 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 4765 | 5445 |
| APD22014.1 | KY065457_p45 | hypothetical protein | phrog_957 | head protein | head and packaging | 1 | 24281 | 24649 |
| APD22000.1 | KY065457_p31 | hypothetical protein | phrog_17529 | unknown function | unknown function | 1 | 14681 | 14845 |
| APD22002.1 | KY065457_p33 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 15244 | 15648 |
| APD21971.1 | KY065457_p2 | abortive infection resistance protein | phrog_2158 | abortive infection resistance protein | moron, auxiliary metabolic gene and host takeover | -1 | 1302 | 2252 |
| APD21992.1 | KY065457_p23 | recombinational DNA repair protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9838 | 10809 |
| APD21976.1 | KY065457_p7 | hypothetical protein | phrog_14088 | unknown function | unknown function | 1 | 4577 | 4789 |
| APD21990.1 | KY065457_p21 | hypothetical protein | phrog_5637 | unknown function | unknown function | 1 | 9262 | 9405 |
| APD22011.1 | KY065457_p42 | hypothetical protein | phrog_1236 | head protein | head and packaging | 1 | 23038 | 23568 |
| APD22013.1 | KY065457_p44 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 23873 | 24280 |
| APD22022.1 | KY065457_p53 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 32734 | 33033 |