| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065458 |
Definition |
Streptococcus phage IPP17, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
34864 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
40.24 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22073.1 | KY065458_p49 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 33908 | 34864 |
| APD22041.1 | KY065458_p17 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 8486 | 8680 |
| APD22058.1 | KY065458_p34 | hypothetical protein | phrog_3673 | Arc-like repressor | transcription regulation | 1 | 18073 | 18342 |
| APD22030.1 | KY065458_p6 | DNA binding protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 3777 | 3980 |
| APD22029.1 | KY065458_p5 | hypothetical protein | phrog_9289 | unknown function | unknown function | -1 | 3240 | 3722 |
| APD22027.1 | KY065458_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2173 | 2556 |
| APD22040.1 | KY065458_p16 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7701 | 8471 |
| APD22038.1 | KY065458_p14 | replication initiation protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6737 | 7561 |
| APD22065.1 | KY065458_p41 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 20887 | 23646 |
| APD22032.1 | KY065458_p8 | hypothetical protein | phrog_20017 | unknown function | unknown function | 1 | 4204 | 4356 |
| APD22055.1 | KY065458_p31 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 15131 | 16333 |
| APD22067.1 | KY065458_p43 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 24366 | 32492 |
| APD22066.1 | KY065458_p42 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 23643 | 24365 |
| APD22068.1 | KY065458_p44 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 32489 | 32605 |
| APD22035.1 | KY065458_p11 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5749 | 6006 |
| APD22063.1 | KY065458_p39 | major tail protein | phrog_88 | major tail protein | tail | 1 | 19600 | 20178 |
| APD22044.1 | KY065458_p20 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 9114 | 9323 |
| APD22028.1 | KY065458_p4 | DNA binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2569 | 2934 |
| APD22054.1 | KY065458_p30 | hypothetical protein | phrog_2955 | unknown function | unknown function | 1 | 14895 | 15113 |
| APD22053.1 | KY065458_p29 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 13157 | 14887 |
| APD22036.1 | KY065458_p12 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 6092 | 6412 |
| APD22057.1 | KY065458_p33 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 16889 | 18061 |
| APD22059.1 | KY065458_p35 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 18345 | 18626 |
| APD22069.1 | KY065458_p45 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 32586 | 32789 |
| APD22026.1 | KY065458_p2 | hypothetical protein | phrog_4654 | unknown function | unknown function | -1 | 1323 | 2135 |
| APD22062.1 | KY065458_p38 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 19265 | 19603 |
| APD22050.1 | KY065458_p26 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 11462 | 12004 |
| APD22048.1 | KY065458_p24 | hypothetical protein | phrog_17871 | unknown function | unknown function | 1 | 10416 | 10604 |
| APD22042.1 | KY065458_p18 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 8680 | 8907 |
| APD22072.1 | KY065458_p48 | LL-H family holin | phrog_608 | holin | lysis | 1 | 33572 | 33904 |
| APD22070.1 | KY065458_p46 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 32792 | 33142 |
| APD22071.1 | KY065458_p47 | holin 1 | phrog_199 | holin | lysis | 1 | 33152 | 33568 |
| APD22031.1 | KY065458_p7 | hypothetical protein | phrog_3168 | unknown function | unknown function | 1 | 3997 | 4194 |
| APD22046.1 | KY065458_p22 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9614 | 10129 |
| APD22039.1 | KY065458_p15 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 7549 | 7707 |
| APD22047.1 | KY065458_p23 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 10129 | 10416 |
| APD22056.1 | KY065458_p32 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 16317 | 16892 |
| APD22064.1 | KY065458_p40 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 20190 | 20609 |
| APD22051.1 | KY065458_p27 | nuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12315 | 12635 |
| APD22025.1 | KY065458_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |
| APD22043.1 | KY065458_p19 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 8960 | 9124 |
| APD22049.1 | KY065458_p25 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 10872 | 11273 |
| APD22037.1 | KY065458_p13 | replication initiation protein | phrog_1555 | unknown function | unknown function | 1 | 6428 | 6718 |
| APD22045.1 | KY065458_p21 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 9295 | 9612 |
| APD22052.1 | KY065458_p28 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 12772 | 13164 |
| APD22033.1 | KY065458_p9 | hypothetical protein | phrog_3634 | unknown function | unknown function | -1 | 4310 | 4969 |
| APD22061.1 | KY065458_p37 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 18909 | 19268 |
| APD22060.1 | KY065458_p36 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 18613 | 18912 |
| APD22034.1 | KY065458_p10 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 5023 | 5736 |