| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065459 |
Definition |
Streptococcus phage IPP18, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
34235 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
40.23 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22098.1 | KY065459_p25 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9532 | 10062 |
| APD22083.1 | KY065459_p10 | hypothetical protein | phrog_2798 | unknown function | unknown function | 1 | 4335 | 4496 |
| APD22108.1 | KY065459_p35 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 14850 | 16580 |
| APD22124.1 | KY065459_p51 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 31957 | 32160 |
| APD22082.1 | KY065459_p9 | hypothetical protein | phrog_3168 | unknown function | unknown function | 1 | 4127 | 4324 |
| APD22112.1 | KY065459_p39 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 18582 | 19754 |
| APD22127.1 | KY065459_p54 | LL-H family holin | phrog_608 | holin | lysis | 1 | 32943 | 33275 |
| APD22095.1 | KY065459_p22 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 8878 | 9045 |
| APD22128.1 | KY065459_p55 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 33279 | 34235 |
| APD22085.1 | KY065459_p12 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4970 | 5680 |
| APD22089.1 | KY065459_p16 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6653 | 7456 |
| APD22115.1 | KY065459_p42 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 20327 | 20626 |
| APD22100.1 | KY065459_p27 | type II DNA modification methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 10380 | 11462 |
| APD22120.1 | KY065459_p47 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 22589 | 25348 |
| APD22076.1 | KY065459_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2271 | 2654 |
| APD22081.1 | KY065459_p8 | DNA binding protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 3907 | 4110 |
| APD22121.1 | KY065459_p48 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 25345 | 26067 |
| APD22104.1 | KY065459_p31 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 12990 | 13532 |
| APD22094.1 | KY065459_p21 | hypothetical protein | phrog_35495 | unknown function | unknown function | 1 | 8793 | 8918 |
| APD22074.1 | KY065459_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |
| APD22093.1 | KY065459_p20 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 8575 | 8793 |
| APD22117.1 | KY065459_p44 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 20967 | 21290 |
| APD22106.1 | KY065459_p33 | nuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14007 | 14327 |
| APD22078.1 | KY065459_p5 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 3318 | 3455 |
| APD22114.1 | KY065459_p41 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 20059 | 20340 |
| APD22084.1 | KY065459_p11 | hypothetical protein | phrog_2542 | unknown function | unknown function | -1 | 4491 | 4916 |
| APD22122.1 | KY065459_p49 | hyaluronidase | phrog_1210 | PblB-type receptor binding | other | 1 | 26068 | 31863 |
| APD22096.1 | KY065459_p23 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 9032 | 9241 |
| APD22105.1 | KY065459_p32 | hypothetical protein | phrog_5627 | unknown function | unknown function | 1 | 13696 | 13887 |
| APD22126.1 | KY065459_p53 | holin 1 | phrog_199 | holin | lysis | 1 | 32523 | 32939 |
| APD22125.1 | KY065459_p52 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 32163 | 32513 |
| APD22080.1 | KY065459_p7 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 3749 | 3895 |
| APD22092.1 | KY065459_p19 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 8381 | 8575 |
| APD22088.1 | KY065459_p15 | hypothetical protein | phrog_1555 | unknown function | unknown function | 1 | 6373 | 6669 |
| APD22087.1 | KY065459_p14 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 6037 | 6357 |
| APD22101.1 | KY065459_p28 | membrane protein | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 11459 | 11842 |
| APD22102.1 | KY065459_p29 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 11854 | 12264 |
| APD22107.1 | KY065459_p34 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 14465 | 14857 |
| APD22077.1 | KY065459_p4 | DNA binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2667 | 3032 |
| APD22091.1 | KY065459_p18 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7596 | 8366 |
| APD22118.1 | KY065459_p45 | hypothetical protein | phrog_88 | major tail protein | tail | 1 | 21302 | 21880 |
| APD22090.1 | KY065459_p17 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 7444 | 7602 |
| APD22111.1 | KY065459_p38 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 18010 | 18585 |
| APD22086.1 | KY065459_p13 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5694 | 5951 |
| APD22097.1 | KY065459_p24 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 9213 | 9530 |
| APD22079.1 | KY065459_p6 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 3409 | 3630 |
| APD22099.1 | KY065459_p26 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 10062 | 10349 |
| APD22116.1 | KY065459_p43 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20623 | 20970 |
| APD22119.1 | KY065459_p46 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 21892 | 22311 |
| APD22123.1 | KY065459_p50 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 31860 | 31976 |
| APD22103.1 | KY065459_p30 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 12401 | 12802 |
| APD22113.1 | KY065459_p40 | hypothetical protein | phrog_390 | Arc-like repressor | transcription regulation | 1 | 19766 | 20056 |
| APD22110.1 | KY065459_p37 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 16824 | 18026 |
| APD22075.1 | KY065459_p2 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 1335 | 2258 |
| APD22109.1 | KY065459_p36 | hypothetical protein | phrog_2955 | unknown function | unknown function | 1 | 16588 | 16806 |