Genomic map of Streptococcus phage IPP19 (KY065460)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065460
Definition
Streptococcus phage IPP19, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
33895
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
40.45
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD22156.1 KY065460_p28 terminase large subunit phrog_9 terminase large subunit head and packaging 1 12328 14058
APD22157.1 KY065460_p29 hypothetical protein phrog_2955 unknown function unknown function 1 14066 14284
APD22135.1 KY065460_p7 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 3957 4214
APD22171.1 KY065460_p43 hypothetical protein phrog_4793 unknown function unknown function 1 31522 31638
APD22154.1 KY065460_p26 nuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11485 11805
APD22133.1 KY065460_p5 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3020 3229
APD22142.1 KY065460_p14 hypothetical protein phrog_1174 unknown function unknown function 1 6871 7098
APD22153.1 KY065460_p25 site-specific recombinase phrog_216 integrase integration and excision 1 10612 11154
APD22167.1 KY065460_p39 hypothetical protein phrog_709 unknown function unknown function 1 19370 19789
APD22175.1 KY065460_p47 LL-H family holin phrog_608 holin lysis 1 32604 32939
APD22139.1 KY065460_p11 hypothetical protein phrog_2108 unknown function unknown function 1 5740 5898
APD22163.1 KY065460_p35 head-tail adaptor phrog_1951 head-tail adaptor connector 1 17805 18104
APD22146.1 KY065460_p18 hypothetical protein phrog_834 unknown function unknown function 1 7560 7877
APD22174.1 KY065460_p46 holin 1 phrog_199 holin lysis 1 32184 32600
APD22147.1 KY065460_p19 hypothetical protein phrog_121 unknown function unknown function 1 7879 8391
APD22173.1 KY065460_p45 hypothetical protein phrog_1164 unknown function unknown function 1 31825 32175
APD22164.1 KY065460_p36 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 18101 18448
APD22131.1 KY065460_p3 hypothetical protein phrog_87 metallo-protease other -1 1972 2355
APD22134.1 KY065460_p6 hypothetical protein phrog_463 anti-repressor transcription regulation 1 3233 3943
APD22168.1 KY065460_p40 hypothetical protein phrog_58 tail length tape measure protein tail 1 20067 23153
APD22151.1 KY065460_p23 hypothetical protein phrog_98 unknown function unknown function 1 9473 9883
APD22161.1 KY065460_p33 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 17244 17534
APD22162.1 KY065460_p34 hypothetical protein phrog_2550 unknown function unknown function 1 17537 17818
APD22169.1 KY065460_p41 hypothetical protein phrog_33 distal tail protein Dit tail 1 23150 23872
APD22129.1 KY065460_p1 integrase phrog_1 integrase integration and excision -1 1 1149
APD22141.1 KY065460_p13 hypothetical protein phrog_1580 unknown function unknown function 1 6677 6871
APD22144.1 KY065460_p16 hypothetical protein phrog_1681 unknown function unknown function 1 7225 7392
APD22137.1 KY065460_p9 hypothetical protein phrog_1555 unknown function unknown function 1 4636 4932
APD22170.1 KY065460_p42 hyaluronidase phrog_1210 PblB-type receptor binding other 1 23873 31525
APD22158.1 KY065460_p30 portal protein phrog_12 portal protein head and packaging 1 14302 15504
APD22166.1 KY065460_p38 hypothetical protein phrog_88 major tail protein tail 1 18780 19358
APD22148.1 KY065460_p20 hypothetical protein phrog_121 unknown function unknown function 1 8384 8947
APD22150.1 KY065460_p22 hypothetical protein phrog_2169 membrane protein moron, auxiliary metabolic gene and host takeover 1 9234 9461
APD22155.1 KY065460_p27 terminase small subunit phrog_361 terminase small subunit head and packaging 1 11943 12335
APD22152.1 KY065460_p24 transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 10020 10421
APD22140.1 KY065460_p12 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 5892 6662
APD22165.1 KY065460_p37 hypothetical protein phrog_78 tail terminator connector 1 18445 18768
APD22136.1 KY065460_p8 lipoprotein phrog_1490 lipoprotein other 1 4300 4620
APD22149.1 KY065460_p21 hypothetical protein phrog_2003 unknown function unknown function 1 8947 9234
APD22132.1 KY065460_p4 transcriptional regulator, Cro/CI family phrog_8 transcriptional regulator transcription regulation -1 2368 2733
APD22130.1 KY065460_p2 hypothetical protein phrog_2700 unknown function unknown function -1 1520 1927
APD22176.1 KY065460_p48 lytic amidase phrog_1110 endolysin lysis 1 32939 33895
APD22145.1 KY065460_p17 hypothetical protein phrog_1638 unknown function unknown function 1 7379 7588
APD22172.1 KY065460_p44 hypothetical protein phrog_1137 unknown function unknown function 1 31619 31822
APD22143.1 KY065460_p15 hypothetical protein phrog_5262 unknown function unknown function 1 7091 7195
APD22138.1 KY065460_p10 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 4916 5752
APD22160.1 KY065460_p32 major capsid protein phrog_10 major head protein head and packaging 1 16060 17232
APD22159.1 KY065460_p31 prohead protease phrog_80 head maturation protease head and packaging 1 15488 16063