| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065461 |
Definition |
Streptococcus phage IPP20, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
37441 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
40.14 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22181.1 | KY065461_p5 | hypothetical protein | phrog_4085 | unknown function | unknown function | -1 | 2829 | 3062 |
| APD22205.1 | KY065461_p29 | membrane protein | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 12139 | 12522 |
| APD22206.1 | KY065461_p30 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 12534 | 12935 |
| APD22220.1 | KY065461_p44 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 21150 | 21509 |
| APD22225.1 | KY065461_p49 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 26220 | 26942 |
| APD22189.1 | KY065461_p13 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 6060 | 6317 |
| APD22183.1 | KY065461_p7 | hypothetical protein | phrog_9289 | unknown function | unknown function | -1 | 3736 | 4218 |
| APD22201.1 | KY065461_p25 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9961 | 10653 |
| APD22195.1 | KY065461_p19 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 8759 | 8953 |
| APD22190.1 | KY065461_p14 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 6403 | 6723 |
| APD22199.1 | KY065461_p23 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 9461 | 9670 |
| APD22196.1 | KY065461_p20 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 8953 | 9180 |
| APD22188.1 | KY065461_p12 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 5336 | 6046 |
| APD22217.1 | KY065461_p41 | hypothetical protein | phrog_3673 | Arc-like repressor | transcription regulation | 1 | 20314 | 20583 |
| APD22178.1 | KY065461_p2 | hypothetical protein | phrog_4654 | unknown function | unknown function | -1 | 1323 | 2135 |
| APD22209.1 | KY065461_p33 | hypothetical protein | phrog_5627 | unknown function | unknown function | 1 | 14251 | 14493 |
| APD22227.1 | KY065461_p51 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 35066 | 35182 |
| APD22218.1 | KY065461_p42 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 20586 | 20867 |
| APD22216.1 | KY065461_p40 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 19136 | 20302 |
| APD22210.1 | KY065461_p34 | nuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14561 | 14881 |
| APD22211.1 | KY065461_p35 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 15019 | 15411 |
| APD22193.1 | KY065461_p17 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 7822 | 7980 |
| APD22214.1 | KY065461_p38 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 17378 | 18580 |
| APD22212.1 | KY065461_p36 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 15404 | 17134 |
| APD22224.1 | KY065461_p48 | hypothetical protein | phrog_58 | tail length tape measure protein | tail | 1 | 23128 | 26223 |
| APD22197.1 | KY065461_p21 | hypothetical protein | phrog_5262 | unknown function | unknown function | 1 | 9173 | 9277 |
| APD22219.1 | KY065461_p43 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 20854 | 21153 |
| APD22186.1 | KY065461_p10 | hypothetical protein | phrog_2798 | unknown function | unknown function | 1 | 4701 | 4862 |
| APD22232.1 | KY065461_p56 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 36485 | 37441 |
| APD22221.1 | KY065461_p45 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 21506 | 21829 |
| APD22203.1 | KY065461_p27 | hypothetical protein | phrog_4667 | unknown function | unknown function | 1 | 10863 | 11063 |
| APD22215.1 | KY065461_p39 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 18564 | 19139 |
| APD22207.1 | KY065461_p31 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 12953 | 13354 |
| APD22180.1 | KY065461_p4 | plasmid stabilization system protein | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | -1 | 2566 | 2829 |
| APD22191.1 | KY065461_p15 | hypothetical protein | phrog_1555 | unknown function | unknown function | 1 | 6739 | 7035 |
| APD22204.1 | KY065461_p28 | type II DNA modification methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 11060 | 12142 |
| APD22179.1 | KY065461_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2173 | 2553 |
| APD22213.1 | KY065461_p37 | hypothetical protein | phrog_2955 | unknown function | unknown function | 1 | 17142 | 17360 |
| APD22182.1 | KY065461_p6 | transcriptional regulator, Cro/CI family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3062 | 3430 |
| APD22229.1 | KY065461_p53 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 35369 | 35719 |
| APD22222.1 | KY065461_p46 | hypothetical protein | phrog_88 | major tail protein | tail | 1 | 21841 | 22419 |
| APD22228.1 | KY065461_p52 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 35163 | 35366 |
| APD22194.1 | KY065461_p18 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7974 | 8744 |
| APD22200.1 | KY065461_p24 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 9642 | 9959 |
| APD22231.1 | KY065461_p55 | LL-H family holin | phrog_608 | holin | lysis | 1 | 36149 | 36481 |
| APD22198.1 | KY065461_p22 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 9307 | 9471 |
| APD22202.1 | KY065461_p26 | hypothetical protein | phrog_5513 | unknown function | unknown function | 1 | 10654 | 10863 |
| APD22177.1 | KY065461_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |
| APD22192.1 | KY065461_p16 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7019 | 7834 |
| APD22230.1 | KY065461_p54 | holin 1 | phrog_199 | holin | lysis | 1 | 35729 | 36145 |
| APD22187.1 | KY065461_p11 | hypothetical protein | phrog_2542 | unknown function | unknown function | -1 | 4857 | 5282 |
| APD22208.1 | KY065461_p32 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 13545 | 14087 |
| APD22226.1 | KY065461_p50 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 26943 | 35069 |
| APD22184.1 | KY065461_p8 | DNA binding protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 4273 | 4476 |
| APD22185.1 | KY065461_p9 | hypothetical protein | phrog_3168 | unknown function | unknown function | 1 | 4493 | 4690 |
| APD22223.1 | KY065461_p47 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 22431 | 22850 |