| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065462 |
Definition |
Streptococcus phage IPP21, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
37192 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
40.2 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22268.1 | KY065462_p36 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 17456 | 18658 |
| APD22269.1 | KY065462_p37 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 18642 | 19217 |
| APD22237.1 | KY065462_p5 | hypothetical protein | phrog_9289 | unknown function | unknown function | -1 | 3240 | 3722 |
| APD22286.1 | KY065462_p54 | holin 1 | phrog_199 | holin | lysis | 1 | 35480 | 35896 |
| APD22283.1 | KY065462_p51 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 34818 | 34934 |
| APD22250.1 | KY065462_p18 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 8460 | 9134 |
| APD22234.1 | KY065462_p2 | hypothetical protein | phrog_4654 | unknown function | unknown function | -1 | 1323 | 2135 |
| APD22257.1 | KY065462_p25 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 10649 | 10936 |
| APD22235.1 | KY065462_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2173 | 2556 |
| APD22254.1 | KY065462_p22 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 9652 | 9861 |
| APD22281.1 | KY065462_p49 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 27372 | 31247 |
| APD22247.1 | KY065462_p15 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 7329 | 7487 |
| APD22282.1 | KY065462_p50 | PblB | phrog_1330 | tail protein | tail | 1 | 31291 | 34821 |
| APD22287.1 | KY065462_p55 | LL-H family holin | phrog_608 | holin | lysis | 1 | 35900 | 36232 |
| APD22275.1 | KY065462_p43 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 21593 | 21916 |
| APD22253.1 | KY065462_p21 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 9498 | 9665 |
| APD22249.1 | KY065462_p17 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 8266 | 8460 |
| APD22240.1 | KY065462_p8 | hypothetical protein | phrog_2798 | unknown function | unknown function | 1 | 4205 | 4366 |
| APD22262.1 | KY065462_p30 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 13132 | 13533 |
| APD22241.1 | KY065462_p9 | hypothetical protein | phrog_2542 | unknown function | unknown function | -1 | 4361 | 4786 |
| APD22256.1 | KY065462_p24 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 10152 | 10649 |
| APD22267.1 | KY065462_p35 | hypothetical protein | phrog_2955 | unknown function | unknown function | 1 | 17220 | 17438 |
| APD22243.1 | KY065462_p11 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5564 | 5821 |
| APD22248.1 | KY065462_p16 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7481 | 8251 |
| APD22242.1 | KY065462_p10 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4840 | 5550 |
| APD22255.1 | KY065462_p23 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 9833 | 10150 |
| APD22266.1 | KY065462_p34 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 15482 | 17212 |
| APD22280.1 | KY065462_p48 | hyaluronidase | phrog_7142 | tail protein | tail | 1 | 26694 | 27299 |
| APD22239.1 | KY065462_p7 | hypothetical protein | phrog_3168 | unknown function | unknown function | 1 | 3997 | 4194 |
| APD22278.1 | KY065462_p46 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 23215 | 25974 |
| APD22285.1 | KY065462_p53 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 35121 | 35471 |
| APD22264.1 | KY065462_p32 | nuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14640 | 14960 |
| APD22277.1 | KY065462_p45 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 22518 | 22937 |
| APD22244.1 | KY065462_p12 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 5907 | 6227 |
| APD22274.1 | KY065462_p42 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 21249 | 21596 |
| APD22279.1 | KY065462_p47 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 25971 | 26693 |
| APD22270.1 | KY065462_p38 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 19214 | 20395 |
| APD22258.1 | KY065462_p26 | hypothetical protein | phrog_4667 | unknown function | unknown function | 1 | 10936 | 11109 |
| APD22259.1 | KY065462_p27 | type II DNA modification methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 11102 | 12193 |
| APD22260.1 | KY065462_p28 | membrane protein | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 12190 | 12573 |
| APD22271.1 | KY065462_p39 | hypothetical protein | phrog_390 | Arc-like repressor | transcription regulation | 1 | 20392 | 20682 |
| APD22245.1 | KY065462_p13 | replication initiation protein | phrog_1555 | unknown function | unknown function | 1 | 6243 | 6536 |
| APD22238.1 | KY065462_p6 | DNA binding protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 3777 | 3980 |
| APD22272.1 | KY065462_p40 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 20685 | 20966 |
| APD22288.1 | KY065462_p56 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 36236 | 37192 |
| APD22236.1 | KY065462_p4 | DNA binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2569 | 2934 |
| APD22265.1 | KY065462_p33 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 15097 | 15489 |
| APD22251.1 | KY065462_p19 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 9144 | 9371 |
| APD22273.1 | KY065462_p41 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 20953 | 21252 |
| APD22284.1 | KY065462_p52 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 34915 | 35118 |
| APD22261.1 | KY065462_p29 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 12585 | 12995 |
| APD22246.1 | KY065462_p14 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6529 | 7341 |
| APD22263.1 | KY065462_p31 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 13721 | 14263 |
| APD22276.1 | KY065462_p44 | hypothetical protein | phrog_88 | major tail protein | tail | 1 | 21928 | 22506 |
| APD22252.1 | KY065462_p20 | hypothetical protein | phrog_5262 | unknown function | unknown function | 1 | 9364 | 9468 |
| APD22233.1 | KY065462_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |