| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065463 |
Definition |
Streptococcus phage IPP22, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
36344 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
40.16 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22334.1 | KY065463_p46 | hypothetical protein | phrog_58 | tail length tape measure protein | tail | 1 | 22030 | 25125 |
| APD22312.1 | KY065463_p24 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 9276 | 9605 |
| APD22318.1 | KY065463_p30 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 11938 | 12339 |
| APD22331.1 | KY065463_p43 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 20408 | 20731 |
| APD22335.1 | KY065463_p47 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 25122 | 25844 |
| APD22304.1 | KY065463_p16 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6653 | 7468 |
| APD22311.1 | KY065463_p23 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 9095 | 9304 |
| APD22341.1 | KY065463_p53 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 35388 | 36344 |
| APD22338.1 | KY065463_p50 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 34272 | 34622 |
| APD22308.1 | KY065463_p20 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 8587 | 8814 |
| APD22319.1 | KY065463_p31 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 12530 | 13072 |
| APD22291.1 | KY065463_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2271 | 2654 |
| APD22306.1 | KY065463_p18 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7608 | 8378 |
| APD22289.1 | KY065463_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |
| APD22330.1 | KY065463_p42 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20064 | 20411 |
| APD22293.1 | KY065463_p5 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 3318 | 3455 |
| APD22337.1 | KY065463_p49 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 34066 | 34269 |
| APD22305.1 | KY065463_p17 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 7456 | 7614 |
| APD22307.1 | KY065463_p19 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 8393 | 8587 |
| APD22298.1 | KY065463_p10 | hypothetical protein | phrog_2798 | unknown function | unknown function | 1 | 4335 | 4496 |
| APD22313.1 | KY065463_p25 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9595 | 10020 |
| APD22333.1 | KY065463_p45 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 21333 | 21752 |
| APD22322.1 | KY065463_p34 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 14291 | 16021 |
| APD22296.1 | KY065463_p8 | DNA binding protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 3907 | 4110 |
| APD22314.1 | KY065463_p26 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 10020 | 10307 |
| APD22323.1 | KY065463_p35 | hypothetical protein | phrog_2955 | unknown function | unknown function | 1 | 16029 | 16247 |
| APD22332.1 | KY065463_p44 | hypothetical protein | phrog_88 | major tail protein | tail | 1 | 20743 | 21321 |
| APD22297.1 | KY065463_p9 | hypothetical protein | phrog_3168 | unknown function | unknown function | 1 | 4127 | 4324 |
| APD22294.1 | KY065463_p6 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 3409 | 3630 |
| APD22327.1 | KY065463_p39 | hypothetical protein | phrog_390 | Arc-like repressor | transcription regulation | 1 | 19207 | 19497 |
| APD22336.1 | KY065463_p48 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 25845 | 33971 |
| APD22309.1 | KY065463_p21 | hypothetical protein | phrog_5262 | unknown function | unknown function | 1 | 8807 | 8911 |
| APD22292.1 | KY065463_p4 | DNA binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2667 | 3032 |
| APD22321.1 | KY065463_p33 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 13906 | 14298 |
| APD22295.1 | KY065463_p7 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 3749 | 3895 |
| APD22299.1 | KY065463_p11 | hypothetical protein | phrog_2542 | unknown function | unknown function | -1 | 4491 | 4916 |
| APD22329.1 | KY065463_p41 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 19768 | 20067 |
| APD22317.1 | KY065463_p29 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 11531 | 11920 |
| APD22302.1 | KY065463_p14 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 6037 | 6357 |
| APD22339.1 | KY065463_p51 | holin 1 | phrog_199 | holin | lysis | 1 | 34632 | 35048 |
| APD22310.1 | KY065463_p22 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 8941 | 9108 |
| APD22328.1 | KY065463_p40 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 19500 | 19781 |
| APD22324.1 | KY065463_p36 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 16265 | 17467 |
| APD22300.1 | KY065463_p12 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4970 | 5680 |
| APD22303.1 | KY065463_p15 | hypothetical protein | phrog_1555 | unknown function | unknown function | 1 | 6373 | 6669 |
| APD22320.1 | KY065463_p32 | nuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13449 | 13769 |
| APD22326.1 | KY065463_p38 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 18023 | 19195 |
| APD22290.1 | KY065463_p2 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 1335 | 2258 |
| APD22340.1 | KY065463_p52 | LL-H family holin | phrog_608 | holin | lysis | 1 | 35052 | 35384 |
| APD22325.1 | KY065463_p37 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 17451 | 18026 |
| APD22301.1 | KY065463_p13 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5694 | 5951 |
| APD22316.1 | KY065463_p28 | DNA-binding protein | phrog_7855 | mazG nucleotide pyrophosphohydrolase | other | 1 | 10818 | 11534 |
| APD22315.1 | KY065463_p27 | DNA N-4 cytosine methyltransferase | phrog_954 | DNA methyltransferase | other | 1 | 10307 | 10768 |