| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065464 |
Definition |
Streptococcus phage IPP23, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
33903 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
37.91 |
Number of singletons |
6 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22383.1 | KY065464_p42 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 23309 | 23716 |
| APD22371.1 | KY065464_p30 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 15013 | 15447 |
| APD22347.1 | KY065464_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4052 | 4204 |
| APD22361.1 | KY065464_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10533 | 10778 |
| APD22391.1 | KY065464_p50 | endolysin | phrog_3558 | tail protein | tail | 1 | 29059 | 30411 |
| APD22369.1 | KY065464_p28 | hypothetical protein | phrog_17529 | unknown function | unknown function | 1 | 14465 | 14665 |
| APD22377.1 | KY065464_p36 | hypothetical protein | phrog_11404 | unknown function | unknown function | 1 | 20374 | 20565 |
| APD22395.1 | KY065464_p54 | lysin | phrog_998 | endolysin | lysis | 1 | 33016 | 33903 |
| APD22390.1 | KY065464_p49 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28343 | 29059 |
| APD22374.1 | KY065464_p33 | serine protein kinase | phrog_64 | portal protein | head and packaging | 1 | 17356 | 18459 |
| APD22355.1 | KY065464_p14 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 7709 | 7915 |
| APD22368.1 | KY065464_p27 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 14334 | 14468 |
| APD22345.1 | KY065464_p4 | cI-like repressor | phrog_87 | metallo-protease | other | -1 | 3019 | 3396 |
| APD22384.1 | KY065464_p43 | hypothetical protein | phrog_957 | head protein | head and packaging | 1 | 23717 | 24085 |
| APD22344.1 | KY065464_p3 | hypothetical protein | phrog_2695 | unknown function | unknown function | -1 | 1931 | 3004 |
| APD22353.1 | KY065464_p12 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 6667 | 6933 |
| APD22360.1 | KY065464_p19 | hypothetical protein | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 9721 | 10533 |
| APD22386.1 | KY065464_p45 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 24713 | 25141 |
| APD22394.1 | KY065464_p53 | LL-H family holin | phrog_608 | holin | lysis | 1 | 32681 | 33013 |
| APD22352.1 | KY065464_p11 | hypothetical protein | phrog_2232 | unknown function | unknown function | -1 | 5705 | 6490 |
| APD22370.1 | KY065464_p29 | hypothetical protein | phrog_4455 | unknown function | unknown function | 1 | 14677 | 14937 |
| APD22375.1 | KY065464_p34 | hypothetical protein | phrog_38367 | unknown function | unknown function | 1 | 18481 | 18843 |
| APD22376.1 | KY065464_p35 | hypothetical protein | phrog_595 | head maturation protease | head and packaging | 1 | 18788 | 20368 |
| APD22356.1 | KY065464_p15 | hypothetical protein | phrog_3819 | unknown function | unknown function | 1 | 7908 | 8177 |
| APD22348.1 | KY065464_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4213 | 4428 |
| APD22380.1 | KY065464_p39 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 22214 | 22441 |
| APD22365.1 | KY065464_p24 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 12207 | 12611 |
| APD22389.1 | KY065464_p48 | tail tape measure protein | phrog_991 | tail length tape measure protein | tail | 1 | 26355 | 28349 |
| APD22367.1 | KY065464_p26 | hypothetical protein | phrog_2668 | unknown function | unknown function | 1 | 13891 | 14322 |
| APD22350.1 | KY065464_p9 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 4824 | 5546 |
| APD22362.1 | KY065464_p21 | hypothetical protein | phrog_25323 | unknown function | unknown function | 1 | 10795 | 11310 |
| APD22387.1 | KY065464_p46 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 25237 | 25446 |
| APD22359.1 | KY065464_p18 | recombinational DNA repair protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8740 | 9717 |
| APD22378.1 | KY065464_p37 | methyl-accepting chemotaxis protein scaffolding protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 20728 | 21267 |
| APD22393.1 | KY065464_p52 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 32380 | 32679 |
| APD22385.1 | KY065464_p44 | hypothetical protein | phrog_885 | major tail protein | tail | 1 | 24086 | 24703 |
| APD22343.1 | KY065464_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1413 | 1904 |
| APD22381.1 | KY065464_p40 | hypothetical protein | phrog_1236 | head protein | head and packaging | 1 | 22474 | 23004 |
| APD22358.1 | KY065464_p17 | hypothetical protein | phrog_2553 | unknown function | unknown function | 1 | 8413 | 8592 |
| APD22357.1 | KY065464_p16 | hypothetical protein | phrog_5637 | unknown function | unknown function | 1 | 8164 | 8307 |
| APD22372.1 | KY065464_p31 | hypothetical protein | phrog_4102 | terminase small subunit | head and packaging | 1 | 15568 | 15966 |
| APD22349.1 | KY065464_p8 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4622 | 4813 |
| APD22363.1 | KY065464_p22 | type II DNA modification methyltransferase | singleton | unknown function | unknown function | 1 | 11415 | 11708 |
| APD22354.1 | KY065464_p13 | excisionase | phrog_904 | excisionase | integration and excision | 1 | 7395 | 7706 |
| APD22342.1 | KY065464_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1143 |
| APD22373.1 | KY065464_p32 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 15959 | 17347 |
| APD22382.1 | KY065464_p41 | hypothetical protein | phrog_1059 | head-tail adaptor | connector | 1 | 23004 | 23309 |
| APD22351.1 | KY065464_p10 | hypothetical protein | phrog_11403 | unknown function | unknown function | 1 | 5546 | 5710 |
| APD22366.1 | KY065464_p25 | type I restriction-modification system, DNA-methyltransferase subunit M | phrog_6380 | DNA methyltransferase | other | 1 | 12908 | 13897 |
| APD22388.1 | KY065464_p47 | hypothetical protein | phrog_6900 | tail length tape measure protein | tail | 1 | 25451 | 26143 |
| APD22364.1 | KY065464_p23 | DNA-binding protein | phrog_1992 | MazG-like pyrophosphatase | other | 1 | 11719 | 12210 |
| APD22379.1 | KY065464_p38 | major capsid protein | phrog_422 | major head protein | head and packaging | 1 | 21286 | 22203 |
| APD22392.1 | KY065464_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30412 | 32367 |
| APD22346.1 | KY065464_p5 | DNA-binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3383 | 3754 |