| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065465 |
Definition |
Streptococcus phage IPP24, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
34638 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
39.62 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22422.1 | KY065465_p27 | hypothetical protein | phrog_1271 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11943 | 12389 |
| APD22430.1 | KY065465_p35 | minor capsid protein | phrog_581 | minor head protein | head and packaging | 1 | 17706 | 19376 |
| APD22400.1 | KY065465_p5 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3313 | 3528 |
| APD22436.1 | KY065465_p41 | hypothetical protein | phrog_2724 | unknown function | unknown function | 1 | 21820 | 22068 |
| APD22425.1 | KY065465_p30 | AbrB family transcriptional regulator | phrog_9969 | transcriptional regulator | transcription regulation | -1 | 13138 | 13353 |
| APD22443.1 | KY065465_p48 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 24322 | 24681 |
| APD22396.1 | KY065465_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD22426.1 | KY065465_p31 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 13483 | 13929 |
| APD22413.1 | KY065465_p18 | single-strand binding protein family protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 8377 | 8799 |
| APD22428.1 | KY065465_p33 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 14886 | 16175 |
| APD22421.1 | KY065465_p26 | DNA binding protein | phrog_715 | MazG-like pyrophosphatase | other | 1 | 11627 | 11956 |
| APD22412.1 | KY065465_p17 | hypothetical protein | phrog_4027 | unknown function | unknown function | 1 | 8061 | 8384 |
| APD22418.1 | KY065465_p23 | hypothetical protein | phrog_14577 | unknown function | unknown function | 1 | 10803 | 11015 |
| APD22445.1 | KY065465_p50 | membrane protein | phrog_1204 | tail protein | tail | 1 | 25317 | 28754 |
| APD22402.1 | KY065465_p7 | hypothetical protein | phrog_8019 | unknown function | unknown function | 1 | 4157 | 4408 |
| APD22437.1 | KY065465_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22055 | 22282 |
| APD22405.1 | KY065465_p10 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4997 | 5263 |
| APD22408.1 | KY065465_p13 | hypothetical protein | phrog_4614 | unknown function | unknown function | 1 | 5874 | 6005 |
| APD22440.1 | KY065465_p45 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 23018 | 23410 |
| APD22419.1 | KY065465_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11015 | 11257 |
| APD22449.1 | KY065465_p54 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 33044 | 33343 |
| APD22401.1 | KY065465_p6 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3679 | 3957 |
| APD22406.1 | KY065465_p11 | hypothetical protein | phrog_3819 | unknown function | unknown function | 1 | 5349 | 5603 |
| APD22434.1 | KY065465_p39 | hypothetical protein | phrog_2303 | head scaffolding protein | head and packaging | 1 | 20348 | 20917 |
| APD22438.1 | KY065465_p43 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 22295 | 22696 |
| APD22409.1 | KY065465_p14 | hypothetical protein | phrog_2553 | unknown function | unknown function | 1 | 6009 | 6188 |
| APD22446.1 | KY065465_p51 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28751 | 29470 |
| APD22450.1 | KY065465_p55 | LL-H family holin | phrog_608 | holin | lysis | 1 | 33347 | 33682 |
| APD22444.1 | KY065465_p49 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 24684 | 25301 |
| APD22432.1 | KY065465_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19737 | 19859 |
| APD22398.1 | KY065465_p3 | hypothetical protein | phrog_16607 | unknown function | unknown function | -1 | 1503 | 2399 |
| APD22441.1 | KY065465_p46 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 23410 | 23811 |
| APD22414.1 | KY065465_p19 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8821 | 9510 |
| APD22429.1 | KY065465_p34 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 16193 | 17701 |
| APD22435.1 | KY065465_p40 | major capsid protein | phrog_422 | major head protein | head and packaging | 1 | 20932 | 21804 |
| APD22411.1 | KY065465_p16 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 7007 | 8071 |
| APD22433.1 | KY065465_p38 | hypothetical protein | phrog_1233 | unknown function | unknown function | 1 | 19856 | 20170 |
| APD22424.1 | KY065465_p29 | transcriptional regulator | phrog_1936 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 12801 | 13154 |
| APD22427.1 | KY065465_p32 | hypothetical protein | phrog_1595 | terminase small subunit | head and packaging | 1 | 14405 | 14896 |
| APD22447.1 | KY065465_p52 | membrane metallo-endo-peptidase | phrog_3558 | tail protein | tail | 1 | 29467 | 30843 |
| APD22420.1 | KY065465_p25 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 11370 | 11630 |
| APD22417.1 | KY065465_p22 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 10125 | 10802 |
| APD22439.1 | KY065465_p44 | minor capsid protein | phrog_793 | head-tail adaptor | connector | 1 | 22686 | 23018 |
| APD22399.1 | KY065465_p4 | transcriptional repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2413 | 3147 |
| APD22397.1 | KY065465_p2 | hypothetical protein | phrog_38671 | unknown function | unknown function | 1 | 1309 | 1515 |
| APD22416.1 | KY065465_p21 | hypothetical protein | phrog_803 | host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 9953 | 10132 |
| APD22404.1 | KY065465_p9 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4735 | 4920 |
| APD22448.1 | KY065465_p53 | pectinesterase | phrog_18023 | tail fiber protein | tail | 1 | 30843 | 33029 |
| APD22415.1 | KY065465_p20 | holliday junction resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 9494 | 9913 |
| APD22423.1 | KY065465_p28 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 12370 | 12780 |
| APD22407.1 | KY065465_p12 | hypothetical protein | phrog_8196 | unknown function | unknown function | 1 | 5603 | 5863 |
| APD22403.1 | KY065465_p8 | hypothetical protein | phrog_33411 | unknown function | unknown function | -1 | 4379 | 4588 |
| APD22442.1 | KY065465_p47 | hypothetical protein | phrog_820 | major tail protein | tail | 1 | 23812 | 24273 |
| APD22410.1 | KY065465_p15 | recombination protein Bet | phrog_2760 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6185 | 6997 |
| APD22451.1 | KY065465_p56 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 33682 | 34638 |
| APD22431.1 | KY065465_p36 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 19490 | 19732 |