| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065466 |
Definition |
Streptococcus phage IPP25, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
33895 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
37.91 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22456.1 | KY065466_p5 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 3394 | 3594 |
| APD22479.1 | KY065466_p28 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 13706 | 14122 |
| APD22460.1 | KY065466_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4308 | 4547 |
| APD22464.1 | KY065466_p13 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 5292 | 6056 |
| APD22466.1 | KY065466_p15 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 6528 | 6887 |
| APD22492.1 | KY065466_p41 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 23333 | 23740 |
| APD22471.1 | KY065466_p20 | hypothetical protein | phrog_23177 | unknown function | unknown function | 1 | 9544 | 9834 |
| APD22463.1 | KY065466_p12 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 5090 | 5320 |
| APD22484.1 | KY065466_p33 | serine protein kinase | phrog_64 | portal protein | head and packaging | 1 | 17382 | 18869 |
| APD22488.1 | KY065466_p37 | major capsid protein | phrog_422 | major head protein | head and packaging | 1 | 21310 | 22227 |
| APD22487.1 | KY065466_p36 | methyl-accepting chemotaxis protein scaffolding protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 20752 | 21291 |
| APD22498.1 | KY065466_p47 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28090 | 28806 |
| APD22491.1 | KY065466_p40 | hypothetical protein | phrog_1059 | head-tail adaptor | connector | 1 | 23028 | 23333 |
| APD22474.1 | KY065466_p23 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 11049 | 12449 |
| APD22500.1 | KY065466_p49 | pectinesterase | phrog_18023 | tail fiber protein | tail | 1 | 30159 | 32285 |
| APD22501.1 | KY065466_p50 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 32300 | 32599 |
| APD22475.1 | KY065466_p24 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 12830 | 12982 |
| APD22454.1 | KY065466_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2352 | 2735 |
| APD22457.1 | KY065466_p6 | hypothetical protein | phrog_7607 | unknown function | unknown function | -1 | 3512 | 3751 |
| APD22467.1 | KY065466_p16 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 6887 | 7351 |
| APD22482.1 | KY065466_p31 | terminase | phrog_309 | terminase small subunit | head and packaging | 1 | 15402 | 15992 |
| APD22465.1 | KY065466_p14 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 6049 | 6528 |
| APD22462.1 | KY065466_p11 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 4748 | 5089 |
| APD22483.1 | KY065466_p32 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 16018 | 17373 |
| APD22459.1 | KY065466_p8 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4084 | 4356 |
| APD22486.1 | KY065466_p35 | hypothetical protein | phrog_11404 | unknown function | unknown function | 1 | 20400 | 20591 |
| APD22472.1 | KY065466_p21 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9834 | 10226 |
| APD22477.1 | KY065466_p26 | hypothetical protein | phrog_20205 | unknown function | unknown function | 1 | 13322 | 13486 |
| APD22480.1 | KY065466_p29 | membrane protein | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 14112 | 14423 |
| APD22470.1 | KY065466_p19 | essential recombination function protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8834 | 9544 |
| APD22496.1 | KY065466_p45 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 25261 | 25470 |
| APD22485.1 | KY065466_p34 | hypothetical protein | phrog_595 | head maturation protease | head and packaging | 1 | 18814 | 20394 |
| APD22468.1 | KY065466_p17 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 7320 | 8495 |
| APD22453.1 | KY065466_p2 | type I restriction enzyme related protein | phrog_4225 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 1266 | 2336 |
| APD22455.1 | KY065466_p4 | repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2745 | 3095 |
| APD22461.1 | KY065466_p10 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 4544 | 4735 |
| APD22503.1 | KY065466_p52 | lysin | phrog_6745 | endolysin | lysis | 1 | 32891 | 33895 |
| APD22489.1 | KY065466_p38 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 22238 | 22465 |
| APD22499.1 | KY065466_p48 | endolysin | phrog_3558 | tail protein | tail | 1 | 28806 | 30158 |
| APD22478.1 | KY065466_p27 | hypothetical protein | phrog_14577 | unknown function | unknown function | 1 | 13500 | 13709 |
| APD22476.1 | KY065466_p25 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 12982 | 13320 |
| APD22458.1 | KY065466_p7 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3816 | 4007 |
| APD22481.1 | KY065466_p30 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 14498 | 14947 |
| APD22495.1 | KY065466_p44 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 24737 | 25165 |
| APD22494.1 | KY065466_p43 | hypothetical protein | phrog_885 | major tail protein | tail | 1 | 24110 | 24727 |
| APD22490.1 | KY065466_p39 | hypothetical protein | phrog_1236 | head protein | head and packaging | 1 | 22498 | 23028 |
| APD22469.1 | KY065466_p18 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 8507 | 8821 |
| APD22452.1 | KY065466_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1143 |
| APD22493.1 | KY065466_p42 | hypothetical protein | phrog_957 | head protein | head and packaging | 1 | 23741 | 24109 |
| APD22497.1 | KY065466_p46 | tail tape measure protein | phrog_991 | tail length tape measure protein | tail | 1 | 25475 | 28096 |
| APD22502.1 | KY065466_p51 | hypothetical protein | phrog_297 | holin | lysis | 1 | 32603 | 32881 |
| APD22473.1 | KY065466_p22 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 10238 | 11065 |