Genomic map of Streptococcus phage IPP25 (KY065466)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065466
Definition
Streptococcus phage IPP25, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
33895
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
37.91
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD22456.1 KY065466_p5 hypothetical protein phrog_6987 unknown function unknown function 1 3394 3594
APD22479.1 KY065466_p28 hypothetical protein phrog_98 unknown function unknown function 1 13706 14122
APD22460.1 KY065466_p9 hypothetical protein singleton unknown function unknown function 1 4308 4547
APD22464.1 KY065466_p13 hypothetical protein phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5292 6056
APD22466.1 KY065466_p15 hypothetical protein phrog_1341 unknown function unknown function 1 6528 6887
APD22492.1 KY065466_p41 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 23333 23740
APD22471.1 KY065466_p20 hypothetical protein phrog_23177 unknown function unknown function 1 9544 9834
APD22463.1 KY065466_p12 hypothetical protein phrog_2044 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 5090 5320
APD22484.1 KY065466_p33 serine protein kinase phrog_64 portal protein head and packaging 1 17382 18869
APD22488.1 KY065466_p37 major capsid protein phrog_422 major head protein head and packaging 1 21310 22227
APD22487.1 KY065466_p36 methyl-accepting chemotaxis protein scaffolding protein phrog_194 head scaffolding protein head and packaging 1 20752 21291
APD22498.1 KY065466_p47 hypothetical protein phrog_33 distal tail protein Dit tail 1 28090 28806
APD22491.1 KY065466_p40 hypothetical protein phrog_1059 head-tail adaptor connector 1 23028 23333
APD22474.1 KY065466_p23 hypothetical protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 11049 12449
APD22500.1 KY065466_p49 pectinesterase phrog_18023 tail fiber protein tail 1 30159 32285
APD22501.1 KY065466_p50 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 32300 32599
APD22475.1 KY065466_p24 hypothetical protein phrog_1489 unknown function unknown function 1 12830 12982
APD22454.1 KY065466_p3 hypothetical protein phrog_87 metallo-protease other -1 2352 2735
APD22457.1 KY065466_p6 hypothetical protein phrog_7607 unknown function unknown function -1 3512 3751
APD22467.1 KY065466_p16 hypothetical protein phrog_1981 unknown function unknown function 1 6887 7351
APD22482.1 KY065466_p31 terminase phrog_309 terminase small subunit head and packaging 1 15402 15992
APD22465.1 KY065466_p14 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 6049 6528
APD22462.1 KY065466_p11 hypothetical protein phrog_633 transcriptional regulator transcription regulation 1 4748 5089
APD22483.1 KY065466_p32 hypothetical protein phrog_38 terminase large subunit head and packaging 1 16018 17373
APD22459.1 KY065466_p8 hypothetical protein phrog_2273 unknown function unknown function 1 4084 4356
APD22486.1 KY065466_p35 hypothetical protein phrog_11404 unknown function unknown function 1 20400 20591
APD22472.1 KY065466_p21 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 9834 10226
APD22477.1 KY065466_p26 hypothetical protein phrog_20205 unknown function unknown function 1 13322 13486
APD22480.1 KY065466_p29 membrane protein phrog_2169 membrane protein moron, auxiliary metabolic gene and host takeover 1 14112 14423
APD22470.1 KY065466_p19 essential recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8834 9544
APD22496.1 KY065466_p45 hypothetical protein phrog_1294 peptide methionine sulfoxide reductase other 1 25261 25470
APD22485.1 KY065466_p34 hypothetical protein phrog_595 head maturation protease head and packaging 1 18814 20394
APD22468.1 KY065466_p17 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 7320 8495
APD22453.1 KY065466_p2 type I restriction enzyme related protein phrog_4225 endonuclease DNA, RNA and nucleotide metabolism -1 1266 2336
APD22455.1 KY065466_p4 repressor phrog_8 transcriptional regulator transcription regulation -1 2745 3095
APD22461.1 KY065466_p10 hypothetical protein phrog_5054 unknown function unknown function 1 4544 4735
APD22503.1 KY065466_p52 lysin phrog_6745 endolysin lysis 1 32891 33895
APD22489.1 KY065466_p38 hypothetical protein phrog_1539 Arc-like repressor transcription regulation 1 22238 22465
APD22499.1 KY065466_p48 endolysin phrog_3558 tail protein tail 1 28806 30158
APD22478.1 KY065466_p27 hypothetical protein phrog_14577 unknown function unknown function 1 13500 13709
APD22476.1 KY065466_p25 hypothetical protein phrog_4019 unknown function unknown function 1 12982 13320
APD22458.1 KY065466_p7 DNA-binding protein phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 1 3816 4007
APD22481.1 KY065466_p30 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 14498 14947
APD22495.1 KY065466_p44 hypothetical protein phrog_1021 unknown function unknown function 1 24737 25165
APD22494.1 KY065466_p43 hypothetical protein phrog_885 major tail protein tail 1 24110 24727
APD22490.1 KY065466_p39 hypothetical protein phrog_1236 head protein head and packaging 1 22498 23028
APD22469.1 KY065466_p18 hypothetical protein phrog_2486 unknown function unknown function 1 8507 8821
APD22452.1 KY065466_p1 integrase phrog_1 integrase integration and excision -1 1 1143
APD22493.1 KY065466_p42 hypothetical protein phrog_957 head protein head and packaging 1 23741 24109
APD22497.1 KY065466_p46 tail tape measure protein phrog_991 tail length tape measure protein tail 1 25475 28096
APD22502.1 KY065466_p51 hypothetical protein phrog_297 holin lysis 1 32603 32881
APD22473.1 KY065466_p22 hypothetical protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 10238 11065