| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065467 |
Definition |
Streptococcus phage IPP26, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
34001 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
37.69 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22532.1 | KY065467_p29 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 14707 | 15141 |
| APD22507.1 | KY065467_p4 | hypothetical protein | phrog_4488 | unknown function | unknown function | 1 | 3264 | 3395 |
| APD22521.1 | KY065467_p18 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7330 | 7812 |
| APD22505.1 | KY065467_p2 | hypothetical protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 1542 | 2306 |
| APD22529.1 | KY065467_p26 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 12444 | 13787 |
| APD22543.1 | KY065467_p40 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 23447 | 23854 |
| APD22528.1 | KY065467_p25 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 11620 | 12441 |
| APD22542.1 | KY065467_p39 | hypothetical protein | phrog_1059 | head-tail adaptor | connector | 1 | 23142 | 23447 |
| APD22504.1 | KY065467_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD22518.1 | KY065467_p15 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 6478 | 6819 |
| APD22537.1 | KY065467_p34 | hypothetical protein | phrog_11404 | unknown function | unknown function | 1 | 20513 | 20704 |
| APD22519.1 | KY065467_p16 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 6820 | 7050 |
| APD22514.1 | KY065467_p11 | hypothetical protein | phrog_15530 | unknown function | unknown function | -1 | 5469 | 5672 |
| APD22538.1 | KY065467_p35 | scaffolding protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 20866 | 21405 |
| APD22533.1 | KY065467_p30 | hypothetical protein | phrog_4102 | terminase small subunit | head and packaging | 1 | 15707 | 16105 |
| APD22508.1 | KY065467_p5 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3346 | 4035 |
| APD22552.1 | KY065467_p49 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 32407 | 32706 |
| APD22545.1 | KY065467_p42 | hypothetical protein | phrog_885 | major tail protein | tail | 1 | 24224 | 24841 |
| APD22510.1 | KY065467_p7 | hypothetical protein | phrog_7728 | unknown function | unknown function | -1 | 4252 | 4443 |
| APD22525.1 | KY065467_p22 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 9831 | 10148 |
| APD22554.1 | KY065467_p51 | autolysin | phrog_1110 | endolysin | lysis | 1 | 33045 | 34001 |
| APD22530.1 | KY065467_p27 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 14081 | 14236 |
| APD22534.1 | KY065467_p31 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 16092 | 17486 |
| APD22527.1 | KY065467_p24 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 10944 | 11447 |
| APD22551.1 | KY065467_p48 | GDSL-like lipase/acylhydrolase | phrog_18023 | tail fiber protein | tail | 1 | 30272 | 32392 |
| APD22549.1 | KY065467_p46 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 28203 | 28919 |
| APD22541.1 | KY065467_p38 | hypothetical protein | phrog_1236 | head protein | head and packaging | 1 | 22612 | 23142 |
| APD22511.1 | KY065467_p8 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4591 | 4776 |
| APD22526.1 | KY065467_p23 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 10148 | 10924 |
| APD22535.1 | KY065467_p32 | serine protein kinase | phrog_64 | portal protein | head and packaging | 1 | 17495 | 18982 |
| APD22523.1 | KY065467_p20 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 8171 | 8656 |
| APD22509.1 | KY065467_p6 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 4092 | 4295 |
| APD22517.1 | KY065467_p14 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 6275 | 6466 |
| APD22516.1 | KY065467_p13 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 6084 | 6278 |
| APD22548.1 | KY065467_p45 | tail tape measure protein | phrog_991 | tail length tape measure protein | tail | 1 | 25588 | 28209 |
| APD22524.1 | KY065467_p21 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 8619 | 9812 |
| APD22513.1 | KY065467_p10 | hypothetical protein | phrog_14618 | unknown function | unknown function | 1 | 5036 | 5572 |
| APD22540.1 | KY065467_p37 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 22352 | 22579 |
| APD22547.1 | KY065467_p44 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 25375 | 25584 |
| APD22512.1 | KY065467_p9 | Cro/CI family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4789 | 5004 |
| APD22536.1 | KY065467_p33 | hypothetical protein | phrog_595 | head maturation protease | head and packaging | 1 | 18927 | 20507 |
| APD22546.1 | KY065467_p43 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 24851 | 25279 |
| APD22506.1 | KY065467_p3 | CI-like repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2308 | 3102 |
| APD22544.1 | KY065467_p41 | hypothetical protein | phrog_957 | head protein | head and packaging | 1 | 23855 | 24223 |
| APD22531.1 | KY065467_p28 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 14233 | 14631 |
| APD22539.1 | KY065467_p36 | major capsid protein | phrog_422 | major head protein | head and packaging | 1 | 21424 | 22341 |
| APD22553.1 | KY065467_p50 | LL-H family holin | phrog_608 | holin | lysis | 1 | 32710 | 33045 |
| APD22520.1 | KY065467_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7116 | 7337 |
| APD22522.1 | KY065467_p19 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 7812 | 8171 |
| APD22550.1 | KY065467_p47 | endolysin | phrog_3558 | tail protein | tail | 1 | 28919 | 30271 |
| APD22515.1 | KY065467_p12 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 5815 | 6087 |