| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065468 |
Definition |
Streptococcus phage IPP27, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
32649 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
38.15 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22573.1 | KY065468_p19 | essential recombination function protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8839 | 9537 |
| APD22599.1 | KY065468_p45 | endolysin | phrog_3558 | tail protein | tail | 1 | 27623 | 28975 |
| APD22577.1 | KY065468_p23 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 11042 | 12442 |
| APD22562.1 | KY065468_p8 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 4138 | 4326 |
| APD22568.1 | KY065468_p14 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 6309 | 6668 |
| APD22581.1 | KY065468_p27 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 13293 | 13742 |
| APD22589.1 | KY065468_p35 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 21050 | 21268 |
| APD22559.1 | KY065468_p5 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 2867 | 3058 |
| APD22586.1 | KY065468_p32 | hypothetical protein | phrog_11404 | unknown function | unknown function | 1 | 19210 | 19401 |
| APD22557.1 | KY065468_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1827 | 2210 |
| APD22565.1 | KY065468_p11 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 4868 | 5098 |
| APD22595.1 | KY065468_p41 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 23554 | 23982 |
| APD22593.1 | KY065468_p39 | hypothetical protein | phrog_957 | head protein | head and packaging | 1 | 22558 | 22926 |
| APD22600.1 | KY065468_p46 | hypothetical protein | phrog_18023 | tail fiber protein | tail | 1 | 28976 | 31096 |
| APD22603.1 | KY065468_p49 | lysin | phrog_6745 | endolysin | lysis | 1 | 31648 | 32649 |
| APD22585.1 | KY065468_p31 | hypothetical protein | phrog_595 | head maturation protease | head and packaging | 1 | 17624 | 19204 |
| APD22561.1 | KY065468_p7 | excisionase | phrog_904 | excisionase | integration and excision | 1 | 3777 | 4127 |
| APD22592.1 | KY065468_p38 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 22150 | 22557 |
| APD22567.1 | KY065468_p13 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 5827 | 6309 |
| APD22584.1 | KY065468_p30 | serine protein kinase | phrog_64 | portal protein | head and packaging | 1 | 16192 | 17679 |
| APD22587.1 | KY065468_p33 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 19564 | 20103 |
| APD22576.1 | KY065468_p22 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 10231 | 11058 |
| APD22596.1 | KY065468_p42 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 24078 | 24287 |
| APD22569.1 | KY065468_p15 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 6668 | 7132 |
| APD22588.1 | KY065468_p34 | major capsid protein | phrog_422 | major head protein | head and packaging | 1 | 20122 | 21039 |
| APD22556.1 | KY065468_p2 | lipoprotein | phrog_1717 | unknown function | unknown function | -1 | 1272 | 1811 |
| APD22570.1 | KY065468_p16 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 7101 | 8276 |
| APD22579.1 | KY065468_p25 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 12822 | 12974 |
| APD22575.1 | KY065468_p21 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9827 | 10219 |
| APD22582.1 | KY065468_p28 | HNH endonuclease | phrog_309 | terminase small subunit | head and packaging | 1 | 14175 | 14795 |
| APD22580.1 | KY065468_p26 | hypothetical protein | phrog_14577 | unknown function | unknown function | 1 | 12975 | 13190 |
| APD22566.1 | KY065468_p12 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 5070 | 5834 |
| APD22558.1 | KY065468_p4 | repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2220 | 2570 |
| APD22574.1 | KY065468_p20 | hypothetical protein | phrog_23177 | unknown function | unknown function | 1 | 9537 | 9827 |
| APD22572.1 | KY065468_p18 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 8514 | 8828 |
| APD22598.1 | KY065468_p44 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 26907 | 27623 |
| APD22578.1 | KY065468_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12478 | 12597 |
| APD22591.1 | KY065468_p37 | hypothetical protein | phrog_1059 | head-tail adaptor | connector | 1 | 21845 | 22150 |
| APD22571.1 | KY065468_p17 | hypothetical protein | phrog_14808 | unknown function | unknown function | 1 | 8287 | 8502 |
| APD22594.1 | KY065468_p40 | hypothetical protein | phrog_885 | major tail protein | tail | 1 | 22927 | 23544 |
| APD22555.1 | KY065468_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1152 |
| APD22560.1 | KY065468_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3166 | 3639 |
| APD22563.1 | KY065468_p9 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 4323 | 4514 |
| APD22564.1 | KY065468_p10 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 4526 | 4867 |
| APD22583.1 | KY065468_p29 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 14788 | 16176 |
| APD22601.1 | KY065468_p47 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 31111 | 31392 |
| APD22597.1 | KY065468_p43 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 24292 | 26913 |
| APD22590.1 | KY065468_p36 | hypothetical protein | phrog_1236 | head protein | head and packaging | 1 | 21315 | 21845 |
| APD22602.1 | KY065468_p48 | holin | phrog_297 | holin | lysis | 1 | 31408 | 31638 |