| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065469 |
Definition |
Streptococcus phage IPP28, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
33045 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
39.73 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22615.1 | KY065469_p12 | hypothetical protein | phrog_19120 | unknown function | unknown function | 1 | 6509 | 6697 |
| APD22612.1 | KY065469_p9 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 5175 | 5564 |
| APD22611.1 | KY065469_p8 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4449 | 5162 |
| APD22628.1 | KY065469_p25 | hypothetical protein | phrog_9057 | unknown function | unknown function | 1 | 10320 | 10778 |
| APD22655.1 | KY065469_p52 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 32089 | 33045 |
| APD22610.1 | KY065469_p7 | hypothetical protein | phrog_2232 | unknown function | unknown function | -1 | 3612 | 4397 |
| APD22640.1 | KY065469_p37 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 17338 | 18504 |
| APD22622.1 | KY065469_p19 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 8324 | 8533 |
| APD22620.1 | KY065469_p17 | hypothetical protein | phrog_5262 | unknown function | unknown function | 1 | 8036 | 8140 |
| APD22651.1 | KY065469_p48 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 30767 | 30970 |
| APD22630.1 | KY065469_p27 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 10890 | 11240 |
| APD22631.1 | KY065469_p28 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 11258 | 11659 |
| APD22638.1 | KY065469_p35 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 15580 | 16782 |
| APD22649.1 | KY065469_p46 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 24085 | 24807 |
| APD22654.1 | KY065469_p51 | LL-H family holin | phrog_608 | holin | lysis | 1 | 31753 | 32085 |
| APD22629.1 | KY065469_p26 | DNA-binding protein | singleton | unknown function | unknown function | 1 | 10787 | 10906 |
| APD22639.1 | KY065469_p36 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 16766 | 17341 |
| APD22613.1 | KY065469_p10 | hypothetical protein | phrog_1555 | unknown function | unknown function | 1 | 5580 | 5876 |
| APD22607.1 | KY065469_p4 | DNA binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2567 | 2932 |
| APD22648.1 | KY065469_p45 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 21329 | 24088 |
| APD22626.1 | KY065469_p23 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 9720 | 10058 |
| APD22641.1 | KY065469_p38 | hypothetical protein | phrog_3673 | Arc-like repressor | transcription regulation | 1 | 18516 | 18785 |
| APD22653.1 | KY065469_p50 | holin 1 | phrog_199 | holin | lysis | 1 | 31333 | 31749 |
| APD22618.1 | KY065469_p15 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 7622 | 7816 |
| APD22633.1 | KY065469_p30 | nuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12766 | 13062 |
| APD22650.1 | KY065469_p47 | hyaluronidase | phrog_1210 | PblB-type receptor binding | other | 1 | 24808 | 30672 |
| APD22624.1 | KY065469_p21 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 8824 | 9249 |
| APD22621.1 | KY065469_p18 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 8170 | 8334 |
| APD22635.1 | KY065469_p32 | terminase large subunit | phrog_4914 | terminase large subunit | head and packaging | 1 | 13607 | 14371 |
| APD22625.1 | KY065469_p22 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 9249 | 9536 |
| APD22637.1 | KY065469_p34 | hypothetical protein | phrog_2955 | unknown function | unknown function | 1 | 15344 | 15562 |
| APD22634.1 | KY065469_p31 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 13222 | 13614 |
| APD22606.1 | KY065469_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2171 | 2554 |
| APD22645.1 | KY065469_p42 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 19708 | 20031 |
| APD22608.1 | KY065469_p5 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3233 | 3442 |
| APD22619.1 | KY065469_p16 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 7816 | 8043 |
| APD22627.1 | KY065469_p24 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 10060 | 10320 |
| APD22642.1 | KY065469_p39 | hypothetical protein | phrog_2550 | unknown function | unknown function | 1 | 18788 | 19069 |
| APD22647.1 | KY065469_p44 | hypothetical protein | phrog_709 | unknown function | unknown function | 1 | 20633 | 21052 |
| APD22605.1 | KY065469_p2 | hypothetical protein | phrog_4654 | unknown function | unknown function | -1 | 1321 | 2133 |
| APD22643.1 | KY065469_p40 | head-tail adaptor | phrog_1951 | head-tail adaptor | connector | 1 | 19056 | 19355 |
| APD22636.1 | KY065469_p33 | terminase large subunit | phrog_2699 | terminase large subunit | head and packaging | 1 | 14311 | 15336 |
| APD22644.1 | KY065469_p41 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 19352 | 19711 |
| APD22617.1 | KY065469_p14 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6837 | 7607 |
| APD22604.1 | KY065469_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |
| APD22646.1 | KY065469_p43 | major tail protein | phrog_88 | major tail protein | tail | 1 | 20043 | 20621 |
| APD22623.1 | KY065469_p20 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 8505 | 8834 |
| APD22652.1 | KY065469_p49 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 30973 | 31323 |
| APD22616.1 | KY065469_p13 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 6685 | 6843 |
| APD22609.1 | KY065469_p6 | hypothetical protein | phrog_11403 | unknown function | unknown function | 1 | 3453 | 3617 |
| APD22632.1 | KY065469_p29 | site-specific recombinase | phrog_216 | integrase | integration and excision | 1 | 11847 | 12389 |
| APD22614.1 | KY065469_p11 | hypothetical protein | phrog_11769 | unknown function | unknown function | 1 | 5860 | 6381 |