Genomic map of Streptococcus phage IPP28 (KY065469)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065469
Definition
Streptococcus phage IPP28, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
33045
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
39.73
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD22615.1 KY065469_p12 hypothetical protein phrog_19120 unknown function unknown function 1 6509 6697
APD22612.1 KY065469_p9 lipoprotein phrog_1490 lipoprotein other 1 5175 5564
APD22611.1 KY065469_p8 hypothetical protein phrog_463 anti-repressor transcription regulation 1 4449 5162
APD22628.1 KY065469_p25 hypothetical protein phrog_9057 unknown function unknown function 1 10320 10778
APD22655.1 KY065469_p52 lytic amidase phrog_1110 endolysin lysis 1 32089 33045
APD22610.1 KY065469_p7 hypothetical protein phrog_2232 unknown function unknown function -1 3612 4397
APD22640.1 KY065469_p37 capsid protein phrog_10 major head protein head and packaging 1 17338 18504
APD22622.1 KY065469_p19 hypothetical protein phrog_1638 unknown function unknown function 1 8324 8533
APD22620.1 KY065469_p17 hypothetical protein phrog_5262 unknown function unknown function 1 8036 8140
APD22651.1 KY065469_p48 hypothetical protein phrog_1137 unknown function unknown function 1 30767 30970
APD22630.1 KY065469_p27 hypothetical protein phrog_98 unknown function unknown function 1 10890 11240
APD22631.1 KY065469_p28 transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 11258 11659
APD22638.1 KY065469_p35 portal protein phrog_12 portal protein head and packaging 1 15580 16782
APD22649.1 KY065469_p46 hypothetical protein phrog_33 distal tail protein Dit tail 1 24085 24807
APD22654.1 KY065469_p51 LL-H family holin phrog_608 holin lysis 1 31753 32085
APD22629.1 KY065469_p26 DNA-binding protein singleton unknown function unknown function 1 10787 10906
APD22639.1 KY065469_p36 prohead protease phrog_80 head maturation protease head and packaging 1 16766 17341
APD22613.1 KY065469_p10 hypothetical protein phrog_1555 unknown function unknown function 1 5580 5876
APD22607.1 KY065469_p4 DNA binding protein phrog_8 transcriptional regulator transcription regulation -1 2567 2932
APD22648.1 KY065469_p45 tail tape measure protein phrog_58 tail length tape measure protein tail 1 21329 24088
APD22626.1 KY065469_p23 hypothetical protein phrog_4019 unknown function unknown function 1 9720 10058
APD22641.1 KY065469_p38 hypothetical protein phrog_3673 Arc-like repressor transcription regulation 1 18516 18785
APD22653.1 KY065469_p50 holin 1 phrog_199 holin lysis 1 31333 31749
APD22618.1 KY065469_p15 hypothetical protein phrog_1580 unknown function unknown function 1 7622 7816
APD22633.1 KY065469_p30 nuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 12766 13062
APD22650.1 KY065469_p47 hyaluronidase phrog_1210 PblB-type receptor binding other 1 24808 30672
APD22624.1 KY065469_p21 hypothetical protein phrog_121 unknown function unknown function 1 8824 9249
APD22621.1 KY065469_p18 hypothetical protein phrog_1681 unknown function unknown function 1 8170 8334
APD22635.1 KY065469_p32 terminase large subunit phrog_4914 terminase large subunit head and packaging 1 13607 14371
APD22625.1 KY065469_p22 hypothetical protein phrog_2003 unknown function unknown function 1 9249 9536
APD22637.1 KY065469_p34 hypothetical protein phrog_2955 unknown function unknown function 1 15344 15562
APD22634.1 KY065469_p31 terminase small subunit phrog_361 terminase small subunit head and packaging 1 13222 13614
APD22606.1 KY065469_p3 hypothetical protein phrog_87 metallo-protease other -1 2171 2554
APD22645.1 KY065469_p42 hypothetical protein phrog_78 tail terminator connector 1 19708 20031
APD22608.1 KY065469_p5 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3233 3442
APD22619.1 KY065469_p16 hypothetical protein phrog_1174 unknown function unknown function 1 7816 8043
APD22627.1 KY065469_p24 hypothetical protein phrog_884 unknown function unknown function 1 10060 10320
APD22642.1 KY065469_p39 hypothetical protein phrog_2550 unknown function unknown function 1 18788 19069
APD22647.1 KY065469_p44 hypothetical protein phrog_709 unknown function unknown function 1 20633 21052
APD22605.1 KY065469_p2 hypothetical protein phrog_4654 unknown function unknown function -1 1321 2133
APD22643.1 KY065469_p40 head-tail adaptor phrog_1951 head-tail adaptor connector 1 19056 19355
APD22636.1 KY065469_p33 terminase large subunit phrog_2699 terminase large subunit head and packaging 1 14311 15336
APD22644.1 KY065469_p41 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 19352 19711
APD22617.1 KY065469_p14 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 6837 7607
APD22604.1 KY065469_p1 integrase phrog_1 integrase integration and excision -1 1 1149
APD22646.1 KY065469_p43 major tail protein phrog_88 major tail protein tail 1 20043 20621
APD22623.1 KY065469_p20 hypothetical protein phrog_834 unknown function unknown function 1 8505 8834
APD22652.1 KY065469_p49 hypothetical protein phrog_1164 unknown function unknown function 1 30973 31323
APD22616.1 KY065469_p13 hypothetical protein phrog_2108 unknown function unknown function 1 6685 6843
APD22609.1 KY065469_p6 hypothetical protein phrog_11403 unknown function unknown function 1 3453 3617
APD22632.1 KY065469_p29 site-specific recombinase phrog_216 integrase integration and excision 1 11847 12389
APD22614.1 KY065469_p11 hypothetical protein phrog_11769 unknown function unknown function 1 5860 6381