| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065473 |
Definition |
Streptococcus phage IPP32, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
41421 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
40.26 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD22884.1 | KY065473_p58 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 31955 | 39166 |
| APD22832.1 | KY065473_p6 | hypothetical protein | phrog_4085 | unknown function | unknown function | -1 | 3072 | 3311 |
| APD22854.1 | KY065473_p28 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 11952 | 12773 |
| APD22840.1 | KY065473_p14 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 5644 | 5916 |
| APD22855.1 | KY065473_p29 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 12776 | 14119 |
| APD22841.1 | KY065473_p15 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 5913 | 6107 |
| APD22839.1 | KY065473_p13 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 5419 | 5562 |
| APD22866.1 | KY065473_p40 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19110 | 20579 |
| APD22885.1 | KY065473_p59 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 39163 | 39279 |
| APD22844.1 | KY065473_p18 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 6649 | 6879 |
| APD22859.1 | KY065473_p33 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 15054 | 15368 |
| APD22871.1 | KY065473_p45 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 23036 | 23287 |
| APD22868.1 | KY065473_p42 | hypothetical protein | phrog_3514 | unknown function | unknown function | 1 | 22127 | 22336 |
| APD22863.1 | KY065473_p37 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 16526 | 16987 |
| APD22883.1 | KY065473_p57 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 31600 | 31950 |
| APD22878.1 | KY065473_p52 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 26393 | 26761 |
| APD22827.1 | KY065473_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD22876.1 | KY065473_p50 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 25568 | 25906 |
| APD22864.1 | KY065473_p38 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 17343 | 17822 |
| APD22849.1 | KY065473_p23 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 8897 | 10090 |
| APD22847.1 | KY065473_p21 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 8090 | 8449 |
| APD22834.1 | KY065473_p8 | hypothetical protein | phrog_14618 | unknown function | unknown function | 1 | 3977 | 4513 |
| APD22882.1 | KY065473_p56 | TMP repeat family protein | phrog_1535 | tail length tape measure protein | tail | 1 | 27938 | 31591 |
| APD22830.1 | KY065473_p4 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2416 | 2796 |
| APD22831.1 | KY065473_p5 | plasmid stabilization system protein | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | -1 | 2809 | 3072 |
| APD22867.1 | KY065473_p41 | head morphogenesis protein | phrog_2841 | minor head protein | head and packaging | 1 | 20542 | 22125 |
| APD22829.1 | KY065473_p3 | hypothetical protein | phrog_16607 | unknown function | unknown function | -1 | 1503 | 2399 |
| APD22889.1 | KY065473_p63 | LL-H family holin | phrog_608 | holin | lysis | 1 | 40129 | 40461 |
| APD22873.1 | KY065473_p47 | carbohydrate-binding family V/XII protein | phrog_422 | major head protein | head and packaging | 1 | 24051 | 25076 |
| APD22853.1 | KY065473_p27 | hypothetical protein | phrog_13710 | unknown function | unknown function | 1 | 11860 | 11964 |
| APD22833.1 | KY065473_p7 | DNA-binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3311 | 3679 |
| APD22838.1 | KY065473_p12 | hypothetical protein | phrog_7409 | unknown function | unknown function | -1 | 5083 | 5301 |
| APD22828.1 | KY065473_p2 | hypothetical protein | phrog_38671 | unknown function | unknown function | 1 | 1309 | 1515 |
| APD22837.1 | KY065473_p11 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 4892 | 5128 |
| APD22835.1 | KY065473_p9 | hypothetical protein | phrog_15530 | unknown function | unknown function | -1 | 4410 | 4613 |
| APD22881.1 | KY065473_p55 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 27601 | 27951 |
| APD22865.1 | KY065473_p39 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 17800 | 19098 |
| APD22860.1 | KY065473_p34 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 15370 | 15876 |
| APD22846.1 | KY065473_p20 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7608 | 8090 |
| APD22888.1 | KY065473_p62 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 39826 | 40125 |
| APD22887.1 | KY065473_p61 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 39466 | 39816 |
| APD22874.1 | KY065473_p48 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 25086 | 25274 |
| APD22869.1 | KY065473_p43 | metal dependent phosphohydrolase, HD region | phrog_990 | metal-dependent phosphohydrolase | other | 1 | 22333 | 22746 |
| APD22842.1 | KY065473_p16 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 6104 | 6295 |
| APD22875.1 | KY065473_p49 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 25276 | 25587 |
| APD22851.1 | KY065473_p25 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 10426 | 11253 |
| APD22872.1 | KY065473_p46 | capsid and scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 23504 | 24028 |
| APD22845.1 | KY065473_p19 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6851 | 7615 |
| APD22848.1 | KY065473_p22 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 8449 | 8934 |
| APD22862.1 | KY065473_p36 | hypothetical protein | phrog_2275 | unknown function | unknown function | 1 | 16137 | 16451 |
| APD22850.1 | KY065473_p24 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 10109 | 10426 |
| APD22852.1 | KY065473_p26 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11273 | 11779 |
| APD22857.1 | KY065473_p31 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 14565 | 14903 |
| APD22836.1 | KY065473_p10 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4678 | 4869 |
| APD22877.1 | KY065473_p51 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 25881 | 26396 |
| APD22861.1 | KY065473_p35 | hypothetical protein | phrog_4615 | unknown function | unknown function | 1 | 15937 | 16116 |
| APD22886.1 | KY065473_p60 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 39260 | 39463 |
| APD22858.1 | KY065473_p32 | hypothetical protein | phrog_3606 | unknown function | unknown function | 1 | 14905 | 15054 |
| APD22856.1 | KY065473_p30 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 14413 | 14565 |
| APD22880.1 | KY065473_p54 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27182 | 27562 |
| APD22870.1 | KY065473_p44 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 22789 | 23034 |
| APD22843.1 | KY065473_p17 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 6307 | 6648 |
| APD22879.1 | KY065473_p53 | major tail protein | phrog_158 | major tail protein | tail | 1 | 26764 | 27177 |
| APD22890.1 | KY065473_p64 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 40465 | 41421 |