| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065475 |
Definition |
Streptococcus phage IPP35, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
40164 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
68 |
%GC |
39.87 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD23025.1 | KY065475_p68 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 39208 | 40164 |
| APD23007.1 | KY065475_p50 | carbohydrate-binding family V/XII protein | phrog_422 | major head protein | head and packaging | 1 | 24461 | 25486 |
| APD22981.1 | KY065475_p24 | RecT family protein | phrog_2760 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8879 | 9643 |
| APD22966.1 | KY065475_p9 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 3731 | 3868 |
| APD22996.1 | KY065475_p39 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 16292 | 16771 |
| APD23005.1 | KY065475_p48 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 23547 | 23759 |
| APD22994.1 | KY065475_p37 | hypothetical protein | phrog_2275 | unknown function | unknown function | 1 | 15046 | 15360 |
| APD23018.1 | KY065475_p61 | hyaluronidase | phrog_1210 | PblB-type receptor binding | other | 1 | 32365 | 37911 |
| APD22973.1 | KY065475_p16 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5995 | 6261 |
| APD23019.1 | KY065475_p62 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 37908 | 38024 |
| APD22958.1 | KY065475_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 990 |
| APD23021.1 | KY065475_p64 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 38211 | 38561 |
| APD22959.1 | KY065475_p2 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1132 | 1512 |
| APD22972.1 | KY065475_p15 | transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 5643 | 5831 |
| APD23002.1 | KY065475_p45 | transposase | phrog_5749 | transposase | integration and excision | -1 | 21737 | 23029 |
| APD22990.1 | KY065475_p33 | holliday junction resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 13306 | 13737 |
| APD22968.1 | KY065475_p11 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 4161 | 4331 |
| APD23003.1 | KY065475_p46 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 23160 | 23423 |
| APD22987.1 | KY065475_p30 | adenine-specific methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 12060 | 12755 |
| APD23008.1 | KY065475_p51 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 25496 | 25684 |
| APD23010.1 | KY065475_p53 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 25978 | 26316 |
| APD23017.1 | KY065475_p60 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 32010 | 32360 |
| APD22961.1 | KY065475_p4 | hypothetical protein | phrog_10787 | unknown function | unknown function | -1 | 2016 | 2438 |
| APD22992.1 | KY065475_p35 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 14279 | 14785 |
| APD22991.1 | KY065475_p34 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 13960 | 14277 |
| APD22980.1 | KY065475_p23 | hypothetical protein | phrog_8688 | unknown function | unknown function | 1 | 8637 | 8867 |
| APD23012.1 | KY065475_p55 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 26803 | 27171 |
| APD23023.1 | KY065475_p66 | hypothetical protein | phrog_21950 | unknown function | unknown function | 1 | 38695 | 38868 |
| APD23016.1 | KY065475_p59 | TMP repeat family protein | phrog_1535 | tail length tape measure protein | tail | 1 | 28348 | 32001 |
| APD22982.1 | KY065475_p25 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 9653 | 10717 |
| APD22974.1 | KY065475_p17 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 6454 | 6657 |
| APD22995.1 | KY065475_p38 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 15435 | 15857 |
| APD23020.1 | KY065475_p63 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 38005 | 38208 |
| APD23015.1 | KY065475_p58 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 28011 | 28361 |
| APD23009.1 | KY065475_p52 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 25686 | 25997 |
| APD23013.1 | KY065475_p56 | major tail protein | phrog_158 | major tail protein | tail | 1 | 27174 | 27587 |
| APD22993.1 | KY065475_p36 | hypothetical protein | phrog_4615 | unknown function | unknown function | 1 | 14846 | 15025 |
| APD23000.1 | KY065475_p43 | hypothetical protein | phrog_3514 | unknown function | unknown function | 1 | 21076 | 21285 |
| APD22970.1 | KY065475_p13 | hypothetical protein | phrog_6297 | unknown function | unknown function | -1 | 4576 | 5382 |
| APD22984.1 | KY065475_p27 | hypothetical protein | phrog_9305 | unknown function | unknown function | 1 | 11201 | 11536 |
| APD22977.1 | KY065475_p20 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 7639 | 7860 |
| APD22960.1 | KY065475_p3 | hypothetical protein | phrog_6701 | unknown function | unknown function | -1 | 1533 | 2012 |
| APD22989.1 | KY065475_p32 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 12980 | 13309 |
| APD23022.1 | KY065475_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38570 | 38749 |
| APD22979.1 | KY065475_p22 | hypothetical protein | phrog_3819 | unknown function | unknown function | 1 | 8128 | 8388 |
| APD22964.1 | KY065475_p7 | hypothetical protein | phrog_7607 | unknown function | unknown function | -1 | 3213 | 3452 |
| APD22986.1 | KY065475_p29 | single-strand binding protein family protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11631 | 12047 |
| APD23004.1 | KY065475_p47 | hypothetical protein | phrog_5469 | unknown function | unknown function | 1 | 23428 | 23592 |
| APD23001.1 | KY065475_p44 | metal dependent phosphohydrolase, HD region | phrog_990 | metal-dependent phosphohydrolase | other | 1 | 21282 | 21695 |
| APD22976.1 | KY065475_p19 | hypothetical protein | phrog_3624 | unknown function | unknown function | 1 | 7478 | 7639 |
| APD22963.1 | KY065475_p6 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 3095 | 3295 |
| APD22962.1 | KY065475_p5 | transcriptional regulator, Cro/CI family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2440 | 2796 |
| APD23006.1 | KY065475_p49 | capsid and scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 23929 | 24438 |
| APD22997.1 | KY065475_p40 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 16749 | 18047 |
| APD23014.1 | KY065475_p57 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27592 | 27972 |
| APD22985.1 | KY065475_p28 | hypothetical protein | phrog_5262 | unknown function | unknown function | 1 | 11536 | 11634 |
| APD22978.1 | KY065475_p21 | hypothetical protein | phrog_8343 | unknown function | unknown function | 1 | 7861 | 8115 |
| APD22969.1 | KY065475_p12 | hypothetical protein | phrog_6598 | unknown function | unknown function | 1 | 4312 | 4641 |
| APD22965.1 | KY065475_p8 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3517 | 3708 |
| APD22967.1 | KY065475_p10 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 3822 | 4043 |
| APD22998.1 | KY065475_p41 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 18059 | 19528 |
| APD22975.1 | KY065475_p18 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 6681 | 7406 |
| APD22988.1 | KY065475_p31 | hypothetical protein | phrog_6041 | unknown function | unknown function | 1 | 12757 | 12966 |
| APD22983.1 | KY065475_p26 | hypothetical protein | phrog_4027 | unknown function | unknown function | 1 | 10720 | 11208 |
| APD23024.1 | KY065475_p67 | LL-H family holin | phrog_608 | holin | lysis | 1 | 38872 | 39204 |
| APD23011.1 | KY065475_p54 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26291 | 26623 |
| APD22999.1 | KY065475_p42 | head morphogenesis protein | phrog_2841 | minor head protein | head and packaging | 1 | 19491 | 21074 |
| APD22971.1 | KY065475_p14 | hypothetical protein | phrog_32236 | unknown function | unknown function | 1 | 5429 | 5590 |