functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
KY065476 |
Definition |
Streptococcus phage IPP36, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
40781 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
67 |
%GC |
40.19 |
Number of singletons |
1 |
Number of paralogs |
1 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
APD23075.1 | KY065476_p50 | hypothetical protein | phrog_2250 | unknown function | unknown function | 1 | 25331 | 25513 |
APD23077.1 | KY065476_p52 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 25693 | 26004 |
APD23073.1 | KY065476_p48 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 23891 | 24475 |
APD23043.1 | KY065476_p18 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 6749 | 7231 |
APD23044.1 | KY065476_p19 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 7231 | 7590 |
APD23082.1 | KY065476_p57 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27599 | 27979 |
APD23057.1 | KY065476_p32 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 14511 | 15023 |
APD23064.1 | KY065476_p39 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 16885 | 17346 |
APD23056.1 | KY065476_p31 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 14195 | 14509 |
APD23053.1 | KY065476_p28 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 13554 | 13706 |
APD23055.1 | KY065476_p30 | hypothetical protein | phrog_3606 | unknown function | unknown function | 1 | 14046 | 14195 |
APD23090.1 | KY065476_p65 | holin 1 | phrog_199 | holin | lysis | 1 | 39069 | 39485 |
APD23060.1 | KY065476_p35 | hypothetical protein | phrog_9055 | unknown function | unknown function | 1 | 15761 | 15895 |
APD23029.1 | KY065476_p4 | hypothetical protein | phrog_1516 | unknown function | unknown function | -1 | 2052 | 2810 |
APD23059.1 | KY065476_p34 | hypothetical protein | phrog_4252 | unknown function | unknown function | 1 | 15603 | 15764 |
APD23042.1 | KY065476_p17 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 5992 | 6756 |
APD23092.1 | KY065476_p67 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 39825 | 40781 |
APD23048.1 | KY065476_p23 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9567 | 10394 |
APD23052.1 | KY065476_p27 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 11917 | 13260 |
APD23069.1 | KY065476_p44 | hypothetical protein | phrog_3514 | unknown function | unknown function | 1 | 22486 | 22695 |
APD23051.1 | KY065476_p26 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 11093 | 11914 |
APD23071.1 | KY065476_p46 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 23148 | 23411 |
APD23045.1 | KY065476_p20 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 7590 | 8075 |
APD23037.1 | KY065476_p12 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4785 | 5057 |
APD23070.1 | KY065476_p45 | metal dependent phosphohydrolase, HD region | phrog_990 | metal-dependent phosphohydrolase | other | 1 | 22692 | 23105 |
APD23078.1 | KY065476_p53 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 25985 | 26323 |
APD23054.1 | KY065476_p29 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 13706 | 14044 |
APD23058.1 | KY065476_p33 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 15016 | 15603 |
APD23063.1 | KY065476_p38 | hypothetical protein | phrog_2275 | unknown function | unknown function | 1 | 16496 | 16810 |
APD23087.1 | KY065476_p62 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 38407 | 38523 |
APD23038.1 | KY065476_p13 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 5054 | 5248 |
APD23039.1 | KY065476_p14 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 5245 | 5436 |
APD23031.1 | KY065476_p6 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 3494 | 3694 |
APD23084.1 | KY065476_p59 | TMP repeat family protein | phrog_1535 | tail length tape measure protein | tail | 1 | 28355 | 31663 |
APD23081.1 | KY065476_p56 | major tail protein | phrog_158 | major tail protein | tail | 1 | 27181 | 27594 |
APD23072.1 | KY065476_p47 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 23413 | 23664 |
APD23089.1 | KY065476_p64 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 38710 | 39060 |
APD23065.1 | KY065476_p40 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 17702 | 18181 |
APD23080.1 | KY065476_p55 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 26810 | 27178 |
APD23068.1 | KY065476_p43 | head morphogenesis protein | phrog_2841 | minor head protein | head and packaging | 1 | 20901 | 22484 |
APD23026.1 | KY065476_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
APD23035.1 | KY065476_p10 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 4221 | 4442 |
APD23086.1 | KY065476_p61 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 32027 | 38410 |
APD23074.1 | KY065476_p49 | hypothetical protein | phrog_544 | major head protein | head and packaging | 1 | 24481 | 25326 |
APD23032.1 | KY065476_p7 | hypothetical protein | phrog_7607 | unknown function | unknown function | -1 | 3612 | 3851 |
APD23091.1 | KY065476_p66 | LL-H family holin | phrog_608 | holin | lysis | 1 | 39489 | 39821 |
APD23041.1 | KY065476_p16 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 5790 | 6020 |
APD23046.1 | KY065476_p21 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 8038 | 9231 |
APD23034.1 | KY065476_p9 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 4130 | 4267 |
APD23066.1 | KY065476_p41 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 18159 | 19457 |
APD23079.1 | KY065476_p54 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26298 | 26813 |
APD23028.1 | KY065476_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1945 | 2052 |
APD23067.1 | KY065476_p42 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19469 | 20938 |
APD23030.1 | KY065476_p5 | DNA-binding helix-turn-helix protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2813 | 3196 |
APD23049.1 | KY065476_p24 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 10414 | 10920 |
APD23076.1 | KY065476_p51 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 25503 | 25691 |
APD23061.1 | KY065476_p36 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 15908 | 16303 |
APD23050.1 | KY065476_p25 | hypothetical protein | phrog_13710 | unknown function | unknown function | 1 | 11001 | 11105 |
APD23088.1 | KY065476_p63 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 38504 | 38707 |
APD23027.1 | KY065476_p2 | LIM domain protein | phrog_27136 | unknown function | unknown function | -1 | 1250 | 1924 |
APD23033.1 | KY065476_p8 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3916 | 4107 |
APD23083.1 | KY065476_p58 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 28018 | 28368 |
APD23047.1 | KY065476_p22 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 9250 | 9567 |
APD23062.1 | KY065476_p37 | hypothetical protein | phrog_4615 | unknown function | unknown function | 1 | 16296 | 16475 |
APD23085.1 | KY065476_p60 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 31672 | 32022 |
APD23040.1 | KY065476_p15 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 5448 | 5789 |
APD23036.1 | KY065476_p11 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 4560 | 4703 |