Genomic map of Streptococcus phage IPP38 (KY065478)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065478
Definition
Streptococcus phage IPP38, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
40403
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
39.97
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23100.1 KY065478_p8 DNA-binding protein phrog_7950 transcriptional repressor transcription regulation 1 4619 4780
APD23113.1 KY065478_p21 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 8398 8880
APD23110.1 KY065478_p18 hypothetical protein phrog_633 transcriptional regulator transcription regulation 1 7097 7438
APD23099.1 KY065478_p7 hypothetical protein phrog_6248 unknown function unknown function 1 4436 4600
APD23103.1 KY065478_p11 hypothetical protein phrog_7728 unknown function unknown function -1 5464 5655
APD23140.1 KY065478_p48 hypothetical protein phrog_933 unknown function unknown function 1 25663 25851
APD23138.1 KY065478_p46 hypothetical protein phrog_544 major head protein head and packaging 1 24634 25479
APD23134.1 KY065478_p42 head morphogenesis protein phrog_115 minor head protein head and packaging 1 21948 23297
APD23154.1 KY065478_p62 LL-H family holin phrog_608 holin lysis 1 39111 39443
APD23155.1 KY065478_p63 lytic amidase phrog_1110 endolysin lysis 1 39447 40403
APD23133.1 KY065478_p41 portal protein phrog_64 portal protein head and packaging 1 20516 21985
APD23108.1 KY065478_p16 hypothetical protein phrog_2648 unknown function unknown function 1 6703 6918
APD23145.1 KY065478_p53 major tail protein phrog_158 major tail protein tail 1 27341 27754
APD23141.1 KY065478_p49 head-tail connector protein phrog_132 head-tail adaptor connector 1 25853 26164
APD23097.1 KY065478_p5 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism -1 3540 4229
APD23121.1 KY065478_p29 hypothetical protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 13565 14908
APD23095.1 KY065478_p3 CI-like repressor phrog_4 transcriptional repressor transcription regulation -1 2505 3296
APD23106.1 KY065478_p14 hypothetical protein phrog_3240 unknown function unknown function -1 6077 6316
APD23137.1 KY065478_p45 scaffold protein phrog_172 head scaffolding protein head and packaging 1 24043 24627
APD23148.1 KY065478_p56 TMP repeat family protein phrog_1535 tail length tape measure protein tail 1 28515 32168
APD23150.1 KY065478_p58 hyaluronidase phrog_1210 PblB-type receptor binding other 1 32532 38147
APD23112.1 KY065478_p20 hypothetical protein phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7641 8405
APD23125.1 KY065478_p33 hypothetical protein phrog_884 unknown function unknown function 1 16206 16466
APD23094.1 KY065478_p2 abortive infection resistance protein phrog_2158 abortive infection resistance protein moron, auxiliary metabolic gene and host takeover -1 1407 2357
APD23114.1 KY065478_p22 hypothetical protein phrog_1341 unknown function unknown function 1 8880 9239
APD23109.1 KY065478_p17 hypothetical protein phrog_5054 unknown function unknown function 1 6897 7085
APD23139.1 KY065478_p47 hypothetical protein phrog_2250 unknown function unknown function 1 25491 25673
APD23111.1 KY065478_p19 hypothetical protein phrog_2044 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 7439 7669
APD23093.1 KY065478_p1 integrase phrog_1 integrase integration and excision -1 1 1128
APD23117.1 KY065478_p25 hypothetical protein phrog_2486 unknown function unknown function 1 10898 11215
APD23127.1 KY065478_p35 DNA-binding protein phrog_14932 DNA binding protein DNA, RNA and nucleotide metabolism 1 16933 17040
APD23126.1 KY065478_p34 hypothetical protein phrog_9057 unknown function unknown function 1 16466 16924
APD23122.1 KY065478_p30 hypothetical protein phrog_1489 unknown function unknown function 1 15201 15356
APD23136.1 KY065478_p44 hypothetical protein phrog_774 unknown function unknown function 1 23661 23873
APD23149.1 KY065478_p57 hypothetical protein phrog_1194 unknown function unknown function 1 32177 32527
APD23124.1 KY065478_p32 hypothetical protein phrog_4252 unknown function unknown function 1 16048 16209
APD23098.1 KY065478_p6 hypothetical protein phrog_4679 unknown function unknown function 1 4286 4420
APD23116.1 KY065478_p24 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 9687 10880
APD23102.1 KY065478_p10 hypothetical protein phrog_4192 unknown function unknown function 1 5304 5507
APD23120.1 KY065478_p28 hypothetical protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 12741 13562
APD23143.1 KY065478_p51 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 26458 26973
APD23107.1 KY065478_p15 hypothetical protein phrog_2273 unknown function unknown function 1 6434 6706
APD23146.1 KY065478_p54 hypothetical protein phrog_183 tail chaperone protein tail 1 27759 28139
APD23144.1 KY065478_p52 hypothetical protein phrog_78 tail terminator connector 1 26970 27338
APD23131.1 KY065478_p39 terminase small subunit phrog_51 terminase small subunit head and packaging 1 18749 19228
APD23147.1 KY065478_p55 hypothetical protein phrog_2066 unknown function unknown function 1 28178 28528
APD23101.1 KY065478_p9 hypothetical protein phrog_6987 unknown function unknown function 1 4865 5065
APD23153.1 KY065478_p61 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 38808 39107
APD23142.1 KY065478_p50 hypothetical protein phrog_2168 unknown function unknown function 1 26145 26483
APD23118.1 KY065478_p26 NTP-binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 11215 12042
APD23119.1 KY065478_p27 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 12062 12568
APD23096.1 KY065478_p4 hypothetical protein phrog_4488 unknown function unknown function 1 3458 3589
APD23135.1 KY065478_p43 RimM protein phrog_15041 unknown function unknown function 1 23285 23512
APD23104.1 KY065478_p12 hypothetical protein phrog_2317 unknown function unknown function 1 5762 5917
APD23128.1 KY065478_p36 hypothetical protein phrog_98 unknown function unknown function 1 17037 17474
APD23130.1 KY065478_p38 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 17915 18319
APD23129.1 KY065478_p37 hypothetical protein phrog_3476 unknown function unknown function 1 17471 17842
APD23152.1 KY065478_p60 hypothetical protein phrog_1164 unknown function unknown function 1 38448 38798
APD23105.1 KY065478_p13 hypothetical protein phrog_1534 unknown function unknown function 1 5914 6084
APD23132.1 KY065478_p40 terminase large subunit phrog_2 terminase large subunit head and packaging 1 19206 20504
APD23115.1 KY065478_p23 hypothetical protein phrog_1981 unknown function unknown function 1 9239 9724
APD23151.1 KY065478_p59 hypothetical protein phrog_1137 unknown function unknown function 1 38242 38445
APD23123.1 KY065478_p31 hypothetical protein phrog_121 unknown function unknown function 1 15353 16048