Genomic map of Streptococcus phage IPP39 (KY065479)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065479
Definition
Streptococcus phage IPP39, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
37761
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
38.36
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23189.1 KY065479_p34 major capsid protein phrog_840 major head protein head and packaging 1 20007 20888
APD23193.1 KY065479_p38 minor capsid protein phrog_556 minor head protein head and packaging 1 21949 22293
APD23164.1 KY065479_p9 hypothetical protein phrog_2715 unknown function unknown function 1 4907 5485
APD23163.1 KY065479_p8 hypothetical protein phrog_2273 unknown function unknown function 1 4558 4824
APD23187.1 KY065479_p32 minor capsid protein 2 phrog_581 minor head protein head and packaging 1 18133 19287
APD23172.1 KY065479_p17 hypothetical protein phrog_774 unknown function unknown function 1 9434 9646
APD23194.1 KY065479_p39 minor capsid protein phrog_913 minor head protein head and packaging 1 22293 22700
APD23177.1 KY065479_p22 hypothetical protein phrog_2003 unknown function unknown function 1 11162 11455
APD23195.1 KY065479_p40 major tail shaft protein phrog_820 major tail protein tail 1 22697 23146
APD23196.1 KY065479_p41 hypothetical protein phrog_1061 unknown function unknown function 1 23211 23705
APD23160.1 KY065479_p5 antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 2848 3573
APD23158.1 KY065479_p3 hypothetical protein singleton unknown function unknown function -1 1589 1735
APD23175.1 KY065479_p20 hypothetical protein phrog_834 unknown function unknown function 1 10316 10630
APD23182.1 KY065479_p27 PBSX family terminase large subunit phrog_2 terminase large subunit head and packaging 1 14457 15692
APD23162.1 KY065479_p7 replication protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 4060 4326
APD23165.1 KY065479_p10 single-strand DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5491 6192
APD23188.1 KY065479_p33 minor structural protein phrog_194 head scaffolding protein head and packaging 1 19426 19989
APD23200.1 KY065479_p45 antireceptor phrog_588 tail fiber protein and host specificity tail 1 29045 33652
APD23198.1 KY065479_p43 hypothetical protein phrog_1686 tail length tape measure protein tail 1 24272 27553
APD23159.1 KY065479_p4 hypothetical protein phrog_28347 unknown function unknown function -1 1807 1968
APD23156.1 KY065479_p1 integrase phrog_1 integrase integration and excision -1 1 933
APD23179.1 KY065479_p24 ParB-like protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 11913 13007
APD23166.1 KY065479_p11 hypothetical protein phrog_674 unknown function unknown function 1 6195 7187
APD23205.1 KY065479_p50 lytic amidase phrog_1110 endolysin lysis 1 36805 37761
APD23173.1 KY065479_p18 holliday junction resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9708 10058
APD23181.1 KY065479_p26 hypothetical protein phrog_2412 unknown function unknown function 1 14093 14392
APD23197.1 KY065479_p42 hypothetical protein phrog_706 unknown function unknown function 1 23710 24279
APD23167.1 KY065479_p12 hypothetical protein phrog_4139 unknown function unknown function 1 7209 7385
APD23171.1 KY065479_p16 hypothetical protein phrog_1029 unknown function unknown function 1 8680 9417
APD23157.1 KY065479_p2 hypothetical protein phrog_5214 unknown function unknown function -1 1056 1571
APD23201.1 KY065479_p46 structural protein phrog_372 tail protein tail 1 33663 35711
APD23199.1 KY065479_p44 tail protein phrog_202 distal tail protein Dit tail 1 27550 29064
APD23174.1 KY065479_p19 hypothetical protein phrog_4706 unknown function unknown function 1 10060 10266
APD23178.1 KY065479_p23 hypothetical protein phrog_3511 unknown function unknown function 1 11455 11847
APD23186.1 KY065479_p31 hypothetical protein phrog_3755 unknown function unknown function 1 17921 18094
APD23170.1 KY065479_p15 hypothetical protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism 1 8244 8678
APD23176.1 KY065479_p21 hypothetical protein phrog_121 unknown function unknown function 1 10617 11162
APD23190.1 KY065479_p35 hypothetical protein phrog_2910 unknown function unknown function 1 20899 21132
APD23191.1 KY065479_p36 hypothetical protein phrog_541 head-tail adaptor connector 1 21175 21567
APD23184.1 KY065479_p29 hypothetical protein phrog_419 unknown function unknown function 1 17260 17508
APD23161.1 KY065479_p6 hypothetical protein phrog_5868 unknown function unknown function 1 3620 3886
APD23180.1 KY065479_p25 hypothetical protein phrog_5057 unknown function unknown function 1 12988 13734
APD23169.1 KY065479_p14 hypothetical protein phrog_3947 unknown function unknown function 1 7987 8190
APD23185.1 KY065479_p30 hypothetical protein phrog_3392 unknown function unknown function 1 17511 17906
APD23168.1 KY065479_p13 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7375 7920
APD23183.1 KY065479_p28 minor capsid protein phrog_533 portal protein head and packaging 1 15756 17273
APD23204.1 KY065479_p49 LL-H family holin phrog_608 holin lysis 1 36464 36796
APD23202.1 KY065479_p47 hypothetical protein phrog_2566 unknown function unknown function 1 35765 36034
APD23192.1 KY065479_p37 minor capsid protein 2 phrog_793 head-tail adaptor connector 1 21557 21949
APD23203.1 KY065479_p48 holin 1 phrog_199 holin lysis 1 36131 36460