| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065480 |
Definition |
Streptococcus phage IPP40, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
40449 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
65 |
%GC |
40.04 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD23232.1 | KY065480_p27 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 12065 | 12568 |
| APD23264.1 | KY065480_p59 | hyaluronidase | phrog_1210 | PblB-type receptor binding | other | 1 | 32531 | 38077 |
| APD23257.1 | KY065480_p52 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26457 | 26972 |
| APD23246.1 | KY065480_p41 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 19205 | 20503 |
| APD23209.1 | KY065480_p4 | hypothetical protein | phrog_4488 | unknown function | unknown function | 1 | 3459 | 3590 |
| APD23270.1 | KY065480_p65 | autolysin | phrog_1110 | endolysin | lysis | 1 | 39493 | 40449 |
| APD23255.1 | KY065480_p50 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 25852 | 26163 |
| APD23219.1 | KY065480_p14 | hypothetical protein | phrog_3240 | unknown function | unknown function | -1 | 6079 | 6318 |
| APD23218.1 | KY065480_p13 | hypothetical protein | phrog_1534 | unknown function | unknown function | 1 | 5916 | 6086 |
| APD23228.1 | KY065480_p23 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 9241 | 9726 |
| APD23239.1 | KY065480_p34 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 16206 | 16466 |
| APD23225.1 | KY065480_p20 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7643 | 8407 |
| APD23249.1 | KY065480_p44 | RimM protein | phrog_15041 | unknown function | unknown function | 1 | 23284 | 23511 |
| APD23207.1 | KY065480_p2 | abortive infection resistance protein | phrog_2158 | abortive infection resistance protein | moron, auxiliary metabolic gene and host takeover | -1 | 1407 | 2357 |
| APD23267.1 | KY065480_p62 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 38377 | 38727 |
| APD23237.1 | KY065480_p32 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 15353 | 16048 |
| APD23211.1 | KY065480_p6 | hypothetical protein | phrog_4679 | unknown function | unknown function | 1 | 4287 | 4421 |
| APD23222.1 | KY065480_p17 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 6899 | 7087 |
| APD23229.1 | KY065480_p24 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9689 | 10882 |
| APD23247.1 | KY065480_p42 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 20515 | 21984 |
| APD23245.1 | KY065480_p40 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 18787 | 19227 |
| APD23230.1 | KY065480_p25 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 10901 | 11218 |
| APD23226.1 | KY065480_p21 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 8400 | 8882 |
| APD23210.1 | KY065480_p5 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3541 | 4230 |
| APD23242.1 | KY065480_p37 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 17037 | 17474 |
| APD23241.1 | KY065480_p36 | DNA-binding protein | phrog_14932 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 16933 | 17040 |
| APD23213.1 | KY065480_p8 | Cro/CI family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4620 | 4835 |
| APD23248.1 | KY065480_p43 | head morphogenesis protein | phrog_115 | minor head protein | head and packaging | 1 | 21947 | 23296 |
| APD23236.1 | KY065480_p31 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 15201 | 15356 |
| APD23251.1 | KY065480_p46 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 24042 | 24626 |
| APD23250.1 | KY065480_p45 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 23660 | 23872 |
| APD23269.1 | KY065480_p64 | LL-H family holin | phrog_608 | holin | lysis | 1 | 39157 | 39489 |
| APD23243.1 | KY065480_p38 | hypothetical protein | phrog_3476 | unknown function | unknown function | 1 | 17471 | 17842 |
| APD23224.1 | KY065480_p19 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 7441 | 7671 |
| APD23240.1 | KY065480_p35 | hypothetical protein | phrog_9057 | unknown function | unknown function | 1 | 16466 | 16924 |
| APD23234.1 | KY065480_p29 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 12741 | 13562 |
| APD23223.1 | KY065480_p18 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 7099 | 7440 |
| APD23212.1 | KY065480_p7 | hypothetical protein | phrog_6248 | unknown function | unknown function | 1 | 4437 | 4601 |
| APD23268.1 | KY065480_p63 | holin 1 | phrog_199 | holin | lysis | 1 | 38737 | 39153 |
| APD23259.1 | KY065480_p54 | major tail protein | phrog_158 | major tail protein | tail | 1 | 27340 | 27753 |
| APD23254.1 | KY065480_p49 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 25662 | 25850 |
| APD23258.1 | KY065480_p53 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 26969 | 27337 |
| APD23216.1 | KY065480_p11 | hypothetical protein | phrog_7728 | unknown function | unknown function | -1 | 5466 | 5657 |
| APD23217.1 | KY065480_p12 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 5764 | 5919 |
| APD23253.1 | KY065480_p48 | hypothetical protein | phrog_2250 | unknown function | unknown function | 1 | 25490 | 25672 |
| APD23235.1 | KY065480_p30 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 13565 | 14908 |
| APD23233.1 | KY065480_p28 | hypothetical protein | phrog_13710 | unknown function | unknown function | 1 | 12649 | 12738 |
| APD23261.1 | KY065480_p56 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 28177 | 28527 |
| APD23238.1 | KY065480_p33 | hypothetical protein | phrog_4252 | unknown function | unknown function | 1 | 16048 | 16209 |
| APD23244.1 | KY065480_p39 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 17915 | 18319 |
| APD23227.1 | KY065480_p22 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 8882 | 9241 |
| APD23220.1 | KY065480_p15 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 6436 | 6708 |
| APD23266.1 | KY065480_p61 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 38171 | 38374 |
| APD23231.1 | KY065480_p26 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 11218 | 12045 |
| APD23215.1 | KY065480_p10 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 5306 | 5509 |
| APD23214.1 | KY065480_p9 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 4867 | 5067 |
| APD23262.1 | KY065480_p57 | TMP repeat family protein | phrog_1535 | tail length tape measure protein | tail | 1 | 28514 | 32167 |
| APD23260.1 | KY065480_p55 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27758 | 28138 |
| APD23208.1 | KY065480_p3 | CI-like repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2506 | 3297 |
| APD23256.1 | KY065480_p51 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 26144 | 26482 |
| APD23206.1 | KY065480_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD23263.1 | KY065480_p58 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 32176 | 32526 |
| APD23265.1 | KY065480_p60 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 38074 | 38190 |
| APD23221.1 | KY065480_p16 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 6705 | 6920 |
| APD23252.1 | KY065480_p47 | hypothetical protein | phrog_544 | major head protein | head and packaging | 1 | 24633 | 25478 |