Genomic map of Streptococcus phage IPP40 (KY065480)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065480
Definition
Streptococcus phage IPP40, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
40449
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
40.04
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23232.1 KY065480_p27 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 12065 12568
APD23264.1 KY065480_p59 hyaluronidase phrog_1210 PblB-type receptor binding other 1 32531 38077
APD23257.1 KY065480_p52 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 26457 26972
APD23246.1 KY065480_p41 terminase large subunit phrog_2 terminase large subunit head and packaging 1 19205 20503
APD23209.1 KY065480_p4 hypothetical protein phrog_4488 unknown function unknown function 1 3459 3590
APD23270.1 KY065480_p65 autolysin phrog_1110 endolysin lysis 1 39493 40449
APD23255.1 KY065480_p50 head-tail connector protein phrog_132 head-tail adaptor connector 1 25852 26163
APD23219.1 KY065480_p14 hypothetical protein phrog_3240 unknown function unknown function -1 6079 6318
APD23218.1 KY065480_p13 hypothetical protein phrog_1534 unknown function unknown function 1 5916 6086
APD23228.1 KY065480_p23 hypothetical protein phrog_1981 unknown function unknown function 1 9241 9726
APD23239.1 KY065480_p34 hypothetical protein phrog_884 unknown function unknown function 1 16206 16466
APD23225.1 KY065480_p20 hypothetical protein phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7643 8407
APD23249.1 KY065480_p44 RimM protein phrog_15041 unknown function unknown function 1 23284 23511
APD23207.1 KY065480_p2 abortive infection resistance protein phrog_2158 abortive infection resistance protein moron, auxiliary metabolic gene and host takeover -1 1407 2357
APD23267.1 KY065480_p62 hypothetical protein phrog_1164 unknown function unknown function 1 38377 38727
APD23237.1 KY065480_p32 hypothetical protein phrog_121 unknown function unknown function 1 15353 16048
APD23211.1 KY065480_p6 hypothetical protein phrog_4679 unknown function unknown function 1 4287 4421
APD23222.1 KY065480_p17 hypothetical protein phrog_5054 unknown function unknown function 1 6899 7087
APD23229.1 KY065480_p24 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 9689 10882
APD23247.1 KY065480_p42 portal protein phrog_64 portal protein head and packaging 1 20515 21984
APD23245.1 KY065480_p40 terminase small subunit phrog_51 terminase small subunit head and packaging 1 18787 19227
APD23230.1 KY065480_p25 hypothetical protein phrog_2486 unknown function unknown function 1 10901 11218
APD23226.1 KY065480_p21 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 8400 8882
APD23210.1 KY065480_p5 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism -1 3541 4230
APD23242.1 KY065480_p37 hypothetical protein phrog_98 unknown function unknown function 1 17037 17474
APD23241.1 KY065480_p36 DNA-binding protein phrog_14932 DNA binding protein DNA, RNA and nucleotide metabolism 1 16933 17040
APD23213.1 KY065480_p8 Cro/CI family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 4620 4835
APD23248.1 KY065480_p43 head morphogenesis protein phrog_115 minor head protein head and packaging 1 21947 23296
APD23236.1 KY065480_p31 hypothetical protein phrog_1489 unknown function unknown function 1 15201 15356
APD23251.1 KY065480_p46 scaffold protein phrog_172 head scaffolding protein head and packaging 1 24042 24626
APD23250.1 KY065480_p45 hypothetical protein phrog_774 unknown function unknown function 1 23660 23872
APD23269.1 KY065480_p64 LL-H family holin phrog_608 holin lysis 1 39157 39489
APD23243.1 KY065480_p38 hypothetical protein phrog_3476 unknown function unknown function 1 17471 17842
APD23224.1 KY065480_p19 hypothetical protein phrog_2044 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 7441 7671
APD23240.1 KY065480_p35 hypothetical protein phrog_9057 unknown function unknown function 1 16466 16924
APD23234.1 KY065480_p29 hypothetical protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 12741 13562
APD23223.1 KY065480_p18 hypothetical protein phrog_633 transcriptional regulator transcription regulation 1 7099 7440
APD23212.1 KY065480_p7 hypothetical protein phrog_6248 unknown function unknown function 1 4437 4601
APD23268.1 KY065480_p63 holin 1 phrog_199 holin lysis 1 38737 39153
APD23259.1 KY065480_p54 major tail protein phrog_158 major tail protein tail 1 27340 27753
APD23254.1 KY065480_p49 hypothetical protein phrog_933 unknown function unknown function 1 25662 25850
APD23258.1 KY065480_p53 hypothetical protein phrog_78 tail terminator connector 1 26969 27337
APD23216.1 KY065480_p11 hypothetical protein phrog_7728 unknown function unknown function -1 5466 5657
APD23217.1 KY065480_p12 hypothetical protein phrog_2317 unknown function unknown function 1 5764 5919
APD23253.1 KY065480_p48 hypothetical protein phrog_2250 unknown function unknown function 1 25490 25672
APD23235.1 KY065480_p30 hypothetical protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 13565 14908
APD23233.1 KY065480_p28 hypothetical protein phrog_13710 unknown function unknown function 1 12649 12738
APD23261.1 KY065480_p56 hypothetical protein phrog_2066 unknown function unknown function 1 28177 28527
APD23238.1 KY065480_p33 hypothetical protein phrog_4252 unknown function unknown function 1 16048 16209
APD23244.1 KY065480_p39 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 17915 18319
APD23227.1 KY065480_p22 hypothetical protein phrog_1341 unknown function unknown function 1 8882 9241
APD23220.1 KY065480_p15 hypothetical protein phrog_2273 unknown function unknown function 1 6436 6708
APD23266.1 KY065480_p61 hypothetical protein phrog_1137 unknown function unknown function 1 38171 38374
APD23231.1 KY065480_p26 NTP-binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 11218 12045
APD23215.1 KY065480_p10 hypothetical protein phrog_4192 unknown function unknown function 1 5306 5509
APD23214.1 KY065480_p9 hypothetical protein phrog_6987 unknown function unknown function 1 4867 5067
APD23262.1 KY065480_p57 TMP repeat family protein phrog_1535 tail length tape measure protein tail 1 28514 32167
APD23260.1 KY065480_p55 hypothetical protein phrog_183 tail chaperone protein tail 1 27758 28138
APD23208.1 KY065480_p3 CI-like repressor phrog_4 transcriptional repressor transcription regulation -1 2506 3297
APD23256.1 KY065480_p51 hypothetical protein phrog_2168 unknown function unknown function 1 26144 26482
APD23206.1 KY065480_p1 integrase phrog_1 integrase integration and excision -1 1 1128
APD23263.1 KY065480_p58 hypothetical protein phrog_1194 unknown function unknown function 1 32176 32526
APD23265.1 KY065480_p60 hypothetical protein phrog_4793 unknown function unknown function 1 38074 38190
APD23221.1 KY065480_p16 hypothetical protein phrog_2648 unknown function unknown function 1 6705 6920
APD23252.1 KY065480_p47 hypothetical protein phrog_544 major head protein head and packaging 1 24633 25478