Genomic map of Streptococcus phage IPP43 (KY065483)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065483
Definition
Streptococcus phage IPP43, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
33032
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
39.13
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23364.1 KY065483_p5 hypothetical protein phrog_4085 unknown function unknown function -1 2930 3163
APD23380.1 KY065483_p21 hypothetical protein phrog_1681 unknown function unknown function 1 9666 9833
APD23397.1 KY065483_p38 major tail protein phrog_2634 major tail protein tail 1 19231 19899
APD23367.1 KY065483_p8 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 4458 4667
APD23365.1 KY065483_p6 transcriptional regulator, Cro/CI family phrog_8 transcriptional regulator transcription regulation -1 3163 3531
APD23362.1 KY065483_p3 hypothetical protein phrog_87 metallo-protease other -1 2274 2654
APD23388.1 KY065483_p29 hypothetical protein phrog_3567 unknown function unknown function 1 12684 13163
APD23369.1 KY065483_p10 hypothetical protein phrog_2232 unknown function unknown function -1 4837 5622
APD23400.1 KY065483_p41 hypothetical protein phrog_33 distal tail protein Dit tail 1 23299 24021
APD23377.1 KY065483_p18 hypothetical protein phrog_1580 unknown function unknown function 1 9118 9312
APD23390.1 KY065483_p31 portal protein phrog_12 portal protein head and packaging 1 14877 16019
APD23393.1 KY065483_p34 hypothetical protein phrog_3305 virion structural protein head and packaging 1 17902 18237
APD23384.1 KY065483_p25 Cro/CI family transcriptional regulator phrog_8 transcriptional regulator transcription regulation 1 10507 10860
APD23391.1 KY065483_p32 protease phrog_80 head maturation protease head and packaging 1 16066 16608
APD23363.1 KY065483_p4 plasmid stabilization system protein phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover -1 2667 2930
APD23381.1 KY065483_p22 hypothetical protein phrog_1638 unknown function unknown function 1 9820 10029
APD23360.1 KY065483_p1 integrase phrog_1 integrase integration and excision -1 1 1149
APD23389.1 KY065483_p30 terminase large subunit phrog_9 terminase large subunit head and packaging 1 13156 14868
APD23395.1 KY065483_p36 hypothetical protein phrog_3334 unknown function unknown function 1 18539 18886
APD23402.1 KY065483_p43 hypothetical protein phrog_1137 unknown function unknown function 1 30749 30952
APD23382.1 KY065483_p23 hypothetical protein phrog_834 unknown function unknown function 1 10001 10318
APD23374.1 KY065483_p15 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 7357 8193
APD23401.1 KY065483_p42 PblB phrog_1210 PblB-type receptor binding other 1 24022 30654
APD23398.1 KY065483_p39 hypothetical protein phrog_3343 unknown function unknown function 1 19901 20377
APD23404.1 KY065483_p45 holin 1 phrog_199 holin lysis 1 31315 31731
APD23371.1 KY065483_p12 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 6398 6655
APD23368.1 KY065483_p9 hypothetical protein phrog_11403 unknown function unknown function 1 4678 4842
APD23386.1 KY065483_p27 site-specific recombinase integrase family protein phrog_216 integrase integration and excision 1 11414 11956
APD23379.1 KY065483_p20 hypothetical protein phrog_5262 unknown function unknown function 1 9532 9636
APD23370.1 KY065483_p11 hypothetical protein phrog_463 anti-repressor transcription regulation 1 5674 6384
APD23403.1 KY065483_p44 hypothetical protein phrog_1164 unknown function unknown function 1 30955 31305
APD23361.1 KY065483_p2 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 1338 2261
APD23385.1 KY065483_p26 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 10842 11156
APD23375.1 KY065483_p16 hypothetical protein phrog_2108 unknown function unknown function 1 8181 8339
APD23376.1 KY065483_p17 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 8333 9103
APD23387.1 KY065483_p28 HNH endonuclease domain-containing protein phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 12221 12541
APD23378.1 KY065483_p19 hypothetical protein phrog_1174 unknown function unknown function 1 9312 9539
APD23394.1 KY065483_p35 head-tail adaptor phrog_3332 head-tail adaptor connector 1 18234 18539
APD23392.1 KY065483_p33 capsid family protein phrog_10 major head protein head and packaging 1 16623 17876
APD23406.1 KY065483_p47 lytic amidase phrog_1110 endolysin lysis 1 32076 33032
APD23405.1 KY065483_p46 LL-H family holin phrog_608 holin lysis 1 31735 32067
APD23399.1 KY065483_p40 tail tape measure family protein phrog_58 tail length tape measure protein tail 1 20564 23302
APD23366.1 KY065483_p7 hypothetical protein phrog_585 unknown function unknown function -1 4021 4404
APD23383.1 KY065483_p24 hypothetical protein singleton unknown function unknown function 1 10320 10412
APD23372.1 KY065483_p13 lipoprotein phrog_1490 lipoprotein other 1 6741 7061
APD23373.1 KY065483_p14 hypothetical protein phrog_1555 unknown function unknown function 1 7077 7373
APD23396.1 KY065483_p37 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 18873 19217