Genomic map of Streptococcus phage IPP48 (KY065487)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065487
Definition
Streptococcus phage IPP48, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
37848
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
38.52
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23581.1 KY065487_p6 antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 2719 3417
APD23620.1 KY065487_p45 hypothetical protein phrog_1686 tail length tape measure protein tail 1 24333 27614
APD23592.1 KY065487_p17 hypothetical protein phrog_3947 unknown function unknown function 1 9157 9360
APD23589.1 KY065487_p14 hypothetical protein phrog_4139 unknown function unknown function 1 7117 7293
APD23611.1 KY065487_p36 major capsid protein phrog_840 major head protein head and packaging 1 20087 20968
APD23608.1 KY065487_p33 hypothetical protein phrog_3755 unknown function unknown function 1 18000 18173
APD23616.1 KY065487_p41 minor capsid protein phrog_913 minor head protein head and packaging 1 22352 22759
APD23618.1 KY065487_p43 hypothetical protein phrog_1061 unknown function unknown function 1 23270 23758
APD23590.1 KY065487_p15 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7283 7858
APD23576.1 KY065487_p1 integrase phrog_1 integrase integration and excision -1 1 1137
APD23621.1 KY065487_p46 tail protein phrog_202 distal tail protein Dit tail 1 27611 29125
APD23599.1 KY065487_p24 hypothetical protein phrog_5513 unknown function unknown function 1 11300 11512
APD23584.1 KY065487_p9 replication protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 4093 4434
APD23606.1 KY065487_p31 PBSX family terminase large subunit phrog_2 terminase large subunit head and packaging 1 15197 16432
APD23622.1 KY065487_p47 antireceptor phrog_588 tail fiber protein and host specificity tail 1 29106 33713
APD23600.1 KY065487_p25 hypothetical protein phrog_3476 unknown function unknown function 1 11509 11880
APD23586.1 KY065487_p11 hypothetical protein phrog_2715 unknown function unknown function 1 4941 5393
APD23595.1 KY065487_p20 holliday junction resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9858 10208
APD23614.1 KY065487_p39 minor capsid protein 2 phrog_793 head-tail adaptor connector 1 21637 22008
APD23591.1 KY065487_p16 type II DNA modification methyltransferase phrog_116 DNA methyltransferase other 1 7884 9122
APD23624.1 KY065487_p49 hypothetical protein phrog_2566 unknown function unknown function 1 35857 36126
APD23626.1 KY065487_p51 LL-H family holin phrog_608 holin lysis 1 36556 36888
APD23596.1 KY065487_p21 hypothetical protein phrog_4706 unknown function unknown function 1 10210 10416
APD23601.1 KY065487_p26 hypothetical protein phrog_2003 unknown function unknown function 1 11901 12194
APD23593.1 KY065487_p18 hypothetical protein phrog_16580 unknown function unknown function 1 9370 9567
APD23580.1 KY065487_p5 repressor phrog_3 transcriptional repressor transcription regulation 1 2523 2717
APD23623.1 KY065487_p48 structural protein phrog_372 tail protein tail 1 33725 35803
APD23582.1 KY065487_p7 hypothetical protein phrog_5868 unknown function unknown function 1 3482 3748
APD23617.1 KY065487_p42 major tail shaft protein phrog_820 major tail protein tail 1 22756 23205
APD23585.1 KY065487_p10 hypothetical protein phrog_2273 unknown function unknown function 1 4591 4857
APD23625.1 KY065487_p50 holin 1 phrog_199 holin lysis 1 36223 36552
APD23613.1 KY065487_p38 hypothetical protein phrog_541 head-tail adaptor connector 1 21255 21647
APD23602.1 KY065487_p27 hypothetical protein phrog_3511 unknown function unknown function 1 12194 12586
APD23612.1 KY065487_p37 hypothetical protein phrog_2910 unknown function unknown function 1 20979 21212
APD23619.1 KY065487_p44 hypothetical protein phrog_706 unknown function unknown function 1 23777 24340
APD23607.1 KY065487_p32 minor capsid protein phrog_533 portal protein head and packaging 1 16496 18013
APD23627.1 KY065487_p52 lytic amidase phrog_1110 endolysin lysis 1 36892 37848
APD23609.1 KY065487_p34 minor capsid protein 2 phrog_581 minor head protein head and packaging 1 18216 19367
APD23583.1 KY065487_p8 hypothetical protein phrog_9136 unknown function unknown function -1 3677 3913
APD23604.1 KY065487_p29 hypothetical protein phrog_5057 unknown function unknown function 1 13727 14473
APD23605.1 KY065487_p30 hypothetical protein phrog_2412 unknown function unknown function 1 14659 15132
APD23594.1 KY065487_p19 hypothetical protein phrog_774 unknown function unknown function 1 9584 9796
APD23598.1 KY065487_p23 hypothetical protein phrog_121 unknown function unknown function 1 10769 11299
APD23597.1 KY065487_p22 hypothetical protein phrog_834 unknown function unknown function 1 10465 10782
APD23615.1 KY065487_p40 minor capsid protein phrog_556 minor head protein head and packaging 1 22008 22352
APD23579.1 KY065487_p4 repressor protein phrog_8 transcriptional regulator transcription regulation -1 1900 2256
APD23578.1 KY065487_p3 hypothetical protein singleton unknown function unknown function -1 1666 1878
APD23603.1 KY065487_p28 ParB-like protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 12652 13746
APD23588.1 KY065487_p13 hypothetical protein phrog_674 unknown function unknown function 1 6103 7095
APD23577.1 KY065487_p2 hypothetical protein phrog_9859 unknown function unknown function -1 1262 1612
APD23610.1 KY065487_p35 minor structural protein phrog_194 head scaffolding protein head and packaging 1 19506 20069
APD23587.1 KY065487_p12 single-strand DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5399 6100