| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065488 |
Definition |
Streptococcus phage IPP50, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
40284 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
62 |
%GC |
39.8 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD23658.1 | KY065488_p31 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 15539 | 16036 |
| APD23643.1 | KY065488_p16 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 6820 | 7050 |
| APD23631.1 | KY065488_p4 | hypothetical protein | phrog_4488 | unknown function | unknown function | 1 | 3264 | 3395 |
| APD23662.1 | KY065488_p35 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 17747 | 18187 |
| APD23674.1 | KY065488_p47 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 25736 | 26047 |
| APD23665.1 | KY065488_p38 | head morphogenesis protein | phrog_2841 | minor head protein | head and packaging | 1 | 20907 | 22490 |
| APD23653.1 | KY065488_p26 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 12945 | 14288 |
| APD23656.1 | KY065488_p29 | hypothetical protein | phrog_3606 | unknown function | unknown function | 1 | 15074 | 15223 |
| APD23642.1 | KY065488_p15 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 6478 | 6819 |
| APD23641.1 | KY065488_p14 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 6275 | 6466 |
| APD23667.1 | KY065488_p40 | metal dependent phosphohydrolase, HD region | phrog_990 | metal-dependent phosphohydrolase | other | 1 | 22698 | 23111 |
| APD23632.1 | KY065488_p5 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3346 | 4035 |
| APD23650.1 | KY065488_p23 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 10597 | 11424 |
| APD23634.1 | KY065488_p7 | hypothetical protein | phrog_7728 | unknown function | unknown function | -1 | 4252 | 4443 |
| APD23683.1 | KY065488_p56 | hyaluronidase | phrog_1210 | PblB-type receptor binding | other | 1 | 32415 | 38030 |
| APD23635.1 | KY065488_p8 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4591 | 4776 |
| APD23677.1 | KY065488_p50 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 26853 | 27221 |
| APD23686.1 | KY065488_p59 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 38330 | 38680 |
| APD23678.1 | KY065488_p51 | major tail protein | phrog_158 | major tail protein | tail | 1 | 27224 | 27637 |
| APD23670.1 | KY065488_p43 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 23582 | 23794 |
| APD23668.1 | KY065488_p41 | hypothetical protein | phrog_14725 | unknown function | unknown function | 1 | 23154 | 23441 |
| APD23651.1 | KY065488_p24 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11444 | 11947 |
| APD23637.1 | KY065488_p10 | hypothetical protein | phrog_14618 | unknown function | unknown function | 1 | 5036 | 5572 |
| APD23646.1 | KY065488_p19 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 8261 | 8620 |
| APD23655.1 | KY065488_p28 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 14734 | 15072 |
| APD23638.1 | KY065488_p11 | hypothetical protein | phrog_15530 | unknown function | unknown function | -1 | 5469 | 5672 |
| APD23688.1 | KY065488_p61 | LL-H family holin | phrog_608 | holin | lysis | 1 | 38992 | 39324 |
| APD23657.1 | KY065488_p30 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 15223 | 15537 |
| APD23647.1 | KY065488_p20 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 8620 | 9105 |
| APD23645.1 | KY065488_p18 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 7779 | 8261 |
| APD23685.1 | KY065488_p58 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 38124 | 38327 |
| APD23673.1 | KY065488_p46 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 25546 | 25734 |
| APD23639.1 | KY065488_p12 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 5815 | 6087 |
| APD23671.1 | KY065488_p44 | capsid and scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 23964 | 24488 |
| APD23628.1 | KY065488_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD23681.1 | KY065488_p54 | TMP repeat family protein | phrog_1535 | tail length tape measure protein | tail | 1 | 28398 | 32051 |
| APD23652.1 | KY065488_p25 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 12028 | 12942 |
| APD23679.1 | KY065488_p52 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27642 | 28022 |
| APD23644.1 | KY065488_p17 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7022 | 7786 |
| APD23669.1 | KY065488_p42 | hypothetical protein | phrog_5469 | unknown function | unknown function | 1 | 23463 | 23627 |
| APD23680.1 | KY065488_p53 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 28061 | 28411 |
| APD23684.1 | KY065488_p57 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 38027 | 38143 |
| APD23633.1 | KY065488_p6 | hypothetical protein | phrog_4192 | unknown function | unknown function | 1 | 4092 | 4295 |
| APD23676.1 | KY065488_p49 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26341 | 26856 |
| APD23630.1 | KY065488_p3 | CI-like repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2308 | 3102 |
| APD23659.1 | KY065488_p32 | hypothetical protein | phrog_6716 | unknown function | unknown function | 1 | 16098 | 16418 |
| APD23636.1 | KY065488_p9 | Cro/CI family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 4789 | 5004 |
| APD23629.1 | KY065488_p2 | hypothetical protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 1542 | 2306 |
| APD23648.1 | KY065488_p21 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9068 | 10261 |
| APD23649.1 | KY065488_p22 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 10280 | 10597 |
| APD23660.1 | KY065488_p33 | hypothetical protein | phrog_3476 | unknown function | unknown function | 1 | 16415 | 16780 |
| APD23682.1 | KY065488_p55 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 32060 | 32410 |
| APD23664.1 | KY065488_p37 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19475 | 20944 |
| APD23654.1 | KY065488_p27 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 14582 | 14734 |
| APD23640.1 | KY065488_p13 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 6084 | 6278 |
| APD23661.1 | KY065488_p34 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 16852 | 17274 |
| APD23663.1 | KY065488_p36 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 18165 | 19463 |
| APD23687.1 | KY065488_p60 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 38689 | 38988 |
| APD23689.1 | KY065488_p62 | autolysin | phrog_1110 | endolysin | lysis | 1 | 39328 | 40284 |
| APD23672.1 | KY065488_p45 | carbohydrate-binding family V/XII protein | phrog_422 | major head protein | head and packaging | 1 | 24511 | 25536 |
| APD23666.1 | KY065488_p39 | hypothetical protein | phrog_3514 | unknown function | unknown function | 1 | 22492 | 22701 |
| APD23675.1 | KY065488_p48 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 26028 | 26366 |