Genomic map of Streptococcus phage IPP50 (KY065488)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065488
Definition
Streptococcus phage IPP50, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
40284
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
39.8
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23658.1 KY065488_p31 hypothetical protein phrog_121 unknown function unknown function 1 15539 16036
APD23643.1 KY065488_p16 hypothetical protein phrog_2044 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 6820 7050
APD23631.1 KY065488_p4 hypothetical protein phrog_4488 unknown function unknown function 1 3264 3395
APD23662.1 KY065488_p35 terminase small subunit phrog_51 terminase small subunit head and packaging 1 17747 18187
APD23674.1 KY065488_p47 head-tail connector protein phrog_132 head-tail adaptor connector 1 25736 26047
APD23665.1 KY065488_p38 head morphogenesis protein phrog_2841 minor head protein head and packaging 1 20907 22490
APD23653.1 KY065488_p26 hypothetical protein phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism 1 12945 14288
APD23656.1 KY065488_p29 hypothetical protein phrog_3606 unknown function unknown function 1 15074 15223
APD23642.1 KY065488_p15 hypothetical protein phrog_633 transcriptional regulator transcription regulation 1 6478 6819
APD23641.1 KY065488_p14 hypothetical protein phrog_5054 unknown function unknown function 1 6275 6466
APD23667.1 KY065488_p40 metal dependent phosphohydrolase, HD region phrog_990 metal-dependent phosphohydrolase other 1 22698 23111
APD23632.1 KY065488_p5 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism -1 3346 4035
APD23650.1 KY065488_p23 NTP-binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 10597 11424
APD23634.1 KY065488_p7 hypothetical protein phrog_7728 unknown function unknown function -1 4252 4443
APD23683.1 KY065488_p56 hyaluronidase phrog_1210 PblB-type receptor binding other 1 32415 38030
APD23635.1 KY065488_p8 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 4591 4776
APD23677.1 KY065488_p50 hypothetical protein phrog_78 tail terminator connector 1 26853 27221
APD23686.1 KY065488_p59 hypothetical protein phrog_1164 unknown function unknown function 1 38330 38680
APD23678.1 KY065488_p51 major tail protein phrog_158 major tail protein tail 1 27224 27637
APD23670.1 KY065488_p43 hypothetical protein phrog_774 unknown function unknown function 1 23582 23794
APD23668.1 KY065488_p41 hypothetical protein phrog_14725 unknown function unknown function 1 23154 23441
APD23651.1 KY065488_p24 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 11444 11947
APD23637.1 KY065488_p10 hypothetical protein phrog_14618 unknown function unknown function 1 5036 5572
APD23646.1 KY065488_p19 hypothetical protein phrog_1341 unknown function unknown function 1 8261 8620
APD23655.1 KY065488_p28 hypothetical protein phrog_4019 unknown function unknown function 1 14734 15072
APD23638.1 KY065488_p11 hypothetical protein phrog_15530 unknown function unknown function -1 5469 5672
APD23688.1 KY065488_p61 LL-H family holin phrog_608 holin lysis 1 38992 39324
APD23657.1 KY065488_p30 hypothetical protein phrog_834 unknown function unknown function 1 15223 15537
APD23647.1 KY065488_p20 hypothetical protein phrog_1981 unknown function unknown function 1 8620 9105
APD23645.1 KY065488_p18 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 7779 8261
APD23685.1 KY065488_p58 hypothetical protein phrog_1137 unknown function unknown function 1 38124 38327
APD23673.1 KY065488_p46 hypothetical protein phrog_933 unknown function unknown function 1 25546 25734
APD23639.1 KY065488_p12 hypothetical protein phrog_2273 unknown function unknown function 1 5815 6087
APD23671.1 KY065488_p44 capsid and scaffold protein phrog_172 head scaffolding protein head and packaging 1 23964 24488
APD23628.1 KY065488_p1 integrase phrog_1 integrase integration and excision -1 1 1128
APD23681.1 KY065488_p54 TMP repeat family protein phrog_1535 tail length tape measure protein tail 1 28398 32051
APD23652.1 KY065488_p25 hypothetical protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 12028 12942
APD23679.1 KY065488_p52 hypothetical protein phrog_183 tail chaperone protein tail 1 27642 28022
APD23644.1 KY065488_p17 hypothetical protein phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7022 7786
APD23669.1 KY065488_p42 hypothetical protein phrog_5469 unknown function unknown function 1 23463 23627
APD23680.1 KY065488_p53 hypothetical protein phrog_2066 unknown function unknown function 1 28061 28411
APD23684.1 KY065488_p57 hypothetical protein phrog_4793 unknown function unknown function 1 38027 38143
APD23633.1 KY065488_p6 hypothetical protein phrog_4192 unknown function unknown function 1 4092 4295
APD23676.1 KY065488_p49 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 26341 26856
APD23630.1 KY065488_p3 CI-like repressor phrog_4 transcriptional repressor transcription regulation -1 2308 3102
APD23659.1 KY065488_p32 hypothetical protein phrog_6716 unknown function unknown function 1 16098 16418
APD23636.1 KY065488_p9 Cro/CI family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 4789 5004
APD23629.1 KY065488_p2 hypothetical protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover -1 1542 2306
APD23648.1 KY065488_p21 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 9068 10261
APD23649.1 KY065488_p22 hypothetical protein phrog_2486 unknown function unknown function 1 10280 10597
APD23660.1 KY065488_p33 hypothetical protein phrog_3476 unknown function unknown function 1 16415 16780
APD23682.1 KY065488_p55 hypothetical protein phrog_1194 unknown function unknown function 1 32060 32410
APD23664.1 KY065488_p37 portal protein phrog_64 portal protein head and packaging 1 19475 20944
APD23654.1 KY065488_p27 hypothetical protein phrog_1489 unknown function unknown function 1 14582 14734
APD23640.1 KY065488_p13 hypothetical protein phrog_2648 unknown function unknown function 1 6084 6278
APD23661.1 KY065488_p34 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 16852 17274
APD23663.1 KY065488_p36 terminase large subunit phrog_2 terminase large subunit head and packaging 1 18165 19463
APD23687.1 KY065488_p60 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 38689 38988
APD23689.1 KY065488_p62 autolysin phrog_1110 endolysin lysis 1 39328 40284
APD23672.1 KY065488_p45 carbohydrate-binding family V/XII protein phrog_422 major head protein head and packaging 1 24511 25536
APD23666.1 KY065488_p39 hypothetical protein phrog_3514 unknown function unknown function 1 22492 22701
APD23675.1 KY065488_p48 hypothetical protein phrog_2168 unknown function unknown function 1 26028 26366