| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065489 |
Definition |
Streptococcus phage IPP51, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
32793 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
39.03 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD23736.1 | KY065489_p47 | LL-H family holin | phrog_608 | holin | lysis | 1 | 31501 | 31833 |
| APD23706.1 | KY065489_p17 | hypothetical protein | phrog_1681 | unknown function | unknown function | 1 | 8410 | 8577 |
| APD23737.1 | KY065489_p48 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 31837 | 32793 |
| APD23732.1 | KY065489_p43 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 30418 | 30534 |
| APD23704.1 | KY065489_p15 | hypothetical protein | phrog_1174 | unknown function | unknown function | 1 | 8056 | 8283 |
| APD23707.1 | KY065489_p18 | hypothetical protein | phrog_1638 | unknown function | unknown function | 1 | 8564 | 8773 |
| APD23733.1 | KY065489_p44 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 30515 | 30718 |
| APD23723.1 | KY065489_p34 | head-tail adaptor | phrog_3332 | head-tail adaptor | connector | 1 | 18231 | 18536 |
| APD23691.1 | KY065489_p2 | hypothetical protein | phrog_4721 | unknown function | unknown function | -1 | 1319 | 2233 |
| APD23727.1 | KY065489_p38 | major tail protein | phrog_2634 | major tail protein | tail | 1 | 19479 | 19895 |
| APD23692.1 | KY065489_p3 | transcriptional repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 2246 | 3001 |
| APD23724.1 | KY065489_p35 | hypothetical protein | phrog_3334 | unknown function | unknown function | 1 | 18536 | 18883 |
| APD23721.1 | KY065489_p32 | capsid family protein | phrog_10 | major head protein | head and packaging | 1 | 16620 | 17873 |
| APD23726.1 | KY065489_p37 | major tail protein | phrog_19891 | major tail protein | tail | 1 | 19228 | 19482 |
| APD23708.1 | KY065489_p19 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 8748 | 9062 |
| APD23714.1 | KY065489_p25 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 10678 | 11142 |
| APD23713.1 | KY065489_p24 | type II DNA modification methyltransferase | singleton | unknown function | unknown function | 1 | 10393 | 10656 |
| APD23715.1 | KY065489_p26 | site-specific recombinase integrase family protein | phrog_216 | integrase | integration and excision | 1 | 11250 | 11792 |
| APD23699.1 | KY065489_p10 | replication initiation protein | phrog_1555 | unknown function | unknown function | 1 | 5824 | 6117 |
| APD23701.1 | KY065489_p12 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 6925 | 7083 |
| APD23712.1 | KY065489_p23 | type II DNA modification methyltransferase | phrog_5999 | DNA methyltransferase | other | 1 | 10111 | 10368 |
| APD23719.1 | KY065489_p30 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 14875 | 16017 |
| APD23730.1 | KY065489_p41 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 23294 | 24016 |
| APD23694.1 | KY065489_p5 | hypothetical protein | phrog_6249 | unknown function | unknown function | 1 | 3596 | 3724 |
| APD23725.1 | KY065489_p36 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 18870 | 19214 |
| APD23728.1 | KY065489_p39 | hypothetical protein | phrog_3343 | unknown function | unknown function | 1 | 19897 | 20379 |
| APD23734.1 | KY065489_p45 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 30721 | 31071 |
| APD23702.1 | KY065489_p13 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7077 | 7847 |
| APD23709.1 | KY065489_p20 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9064 | 9588 |
| APD23720.1 | KY065489_p31 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 16064 | 16606 |
| APD23696.1 | KY065489_p7 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 4419 | 5132 |
| APD23717.1 | KY065489_p28 | hypothetical protein | phrog_3567 | unknown function | unknown function | 1 | 12682 | 13161 |
| APD23735.1 | KY065489_p46 | holin 1 | phrog_199 | holin | lysis | 1 | 31081 | 31497 |
| APD23710.1 | KY065489_p21 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 9588 | 9875 |
| APD23722.1 | KY065489_p33 | hypothetical protein | phrog_3305 | virion structural protein | head and packaging | 1 | 17899 | 18234 |
| APD23711.1 | KY065489_p22 | hypothetical protein | phrog_4667 | unknown function | unknown function | 1 | 9875 | 10048 |
| APD23695.1 | KY065489_p6 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3687 | 4364 |
| APD23718.1 | KY065489_p29 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 13154 | 14866 |
| APD23716.1 | KY065489_p27 | HNH endonuclease domain-containing protein | phrog_6050 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12333 | 12539 |
| APD23693.1 | KY065489_p4 | XRE family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3174 | 3380 |
| APD23705.1 | KY065489_p16 | hypothetical protein | phrog_5262 | unknown function | unknown function | 1 | 8276 | 8380 |
| APD23690.1 | KY065489_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1149 |
| APD23697.1 | KY065489_p8 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5145 | 5402 |
| APD23731.1 | KY065489_p42 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 24017 | 30421 |
| APD23698.1 | KY065489_p9 | lipoprotein | phrog_1490 | lipoprotein | other | 1 | 5488 | 5808 |
| APD23703.1 | KY065489_p14 | hypothetical protein | phrog_1580 | unknown function | unknown function | 1 | 7862 | 8056 |
| APD23700.1 | KY065489_p11 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6101 | 6937 |
| APD23729.1 | KY065489_p40 | tail tape measure family protein | phrog_58 | tail length tape measure protein | tail | 1 | 20559 | 23297 |