Genomic map of Streptococcus phage IPP52 (KY065490)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065490
Definition
Streptococcus phage IPP52, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
36805
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
38.14
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23782.1 KY065490_p45 hypothetical protein phrog_1686 tail length tape measure protein tail 1 24199 27501
APD23761.1 KY065490_p24 hypothetical protein phrog_28798 unknown function unknown function 1 11190 11327
APD23784.1 KY065490_p47 minor structural protein phrog_588 tail fiber protein and host specificity tail 1 29014 32670
APD23740.1 KY065490_p3 hypothetical protein phrog_87 metallo-protease other -1 1795 2175
APD23769.1 KY065490_p32 minor capsid protein phrog_533 portal protein head and packaging 1 16362 17879
APD23768.1 KY065490_p31 PBSX family terminase large subunit phrog_2 terminase large subunit head and packaging 1 15063 16298
APD23746.1 KY065490_p9 single-strand DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 4527 5225
APD23757.1 KY065490_p20 hypothetical protein phrog_4706 unknown function unknown function 1 9814 10020
APD23786.1 KY065490_p49 hypothetical protein phrog_2566 unknown function unknown function 1 34814 35083
APD23775.1 KY065490_p38 hypothetical protein phrog_541 head-tail adaptor connector 1 21121 21513
APD23776.1 KY065490_p39 minor capsid protein 2 phrog_793 head-tail adaptor connector 1 21503 21874
APD23785.1 KY065490_p48 structural protein phrog_372 tail protein tail 1 32682 34760
APD23741.1 KY065490_p4 DNA-binding protein phrog_8 transcriptional regulator transcription regulation -1 2197 2559
APD23750.1 KY065490_p13 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 6748 7323
APD23777.1 KY065490_p40 minor capsid protein phrog_556 minor head protein head and packaging 1 21874 22218
APD23752.1 KY065490_p15 type II DNA modification methyltransferase phrog_116 DNA methyltransferase other 1 7635 8717
APD23742.1 KY065490_p5 DNA-binding protein phrog_1337 DNA binding protein DNA, RNA and nucleotide metabolism 1 2856 3047
APD23764.1 KY065490_p27 hypothetical protein phrog_3511 unknown function unknown function 1 12060 12452
APD23770.1 KY065490_p33 hypothetical protein phrog_3755 unknown function unknown function 1 17833 18039
APD23756.1 KY065490_p19 holliday junction resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9462 9812
APD23772.1 KY065490_p35 minor structural protein phrog_194 head scaffolding protein head and packaging 1 19372 19935
APD23771.1 KY065490_p34 minor capsid protein 2 phrog_581 minor head protein head and packaging 1 18082 19233
APD23753.1 KY065490_p16 hypothetical protein phrog_3947 unknown function unknown function 1 8740 8964
APD23748.1 KY065490_p11 hypothetical protein phrog_674 unknown function unknown function 1 5568 6560
APD23745.1 KY065490_p8 hypothetical protein phrog_2715 unknown function unknown function 1 4069 4521
APD23767.1 KY065490_p30 hypothetical protein phrog_2412 unknown function unknown function 1 14525 14998
APD23773.1 KY065490_p36 major capsid protein phrog_840 major head protein head and packaging 1 19953 20834
APD23749.1 KY065490_p12 hypothetical protein phrog_4139 unknown function unknown function 1 6582 6758
APD23765.1 KY065490_p28 ParB-like protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 12518 13612
APD23789.1 KY065490_p52 lytic amidase phrog_1110 endolysin lysis 1 35849 36805
APD23758.1 KY065490_p21 hypothetical protein phrog_834 unknown function unknown function 1 10069 10386
APD23759.1 KY065490_p22 hypothetical protein phrog_121 unknown function unknown function 1 10373 10903
APD23755.1 KY065490_p18 hypothetical protein phrog_774 unknown function unknown function 1 9188 9400
APD23751.1 KY065490_p14 hypothetical protein phrog_8736 unknown function unknown function 1 7337 7621
APD23787.1 KY065490_p50 holin 1 phrog_199 holin lysis 1 35180 35509
APD23780.1 KY065490_p43 hypothetical protein phrog_1061 unknown function unknown function 1 23136 23624
APD23779.1 KY065490_p42 major tail shaft protein phrog_820 major tail protein tail 1 22622 23071
APD23754.1 KY065490_p17 hypothetical protein phrog_16580 unknown function unknown function 1 8974 9171
APD23778.1 KY065490_p41 minor capsid protein phrog_913 minor head protein head and packaging 1 22218 22625
APD23760.1 KY065490_p23 hypothetical protein phrog_2003 unknown function unknown function 1 10903 11190
APD23744.1 KY065490_p7 hypothetical protein phrog_2273 unknown function unknown function 1 3720 3986
APD23781.1 KY065490_p44 hypothetical protein phrog_706 unknown function unknown function 1 23643 24206
APD23739.1 KY065490_p2 hypothetical protein phrog_5214 unknown function unknown function -1 1262 1777
APD23774.1 KY065490_p37 hypothetical protein phrog_2910 unknown function unknown function 1 20845 21078
APD23743.1 KY065490_p6 replication protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 3222 3488
APD23747.1 KY065490_p10 hypothetical protein phrog_10455 unknown function unknown function 1 5229 5555
APD23763.1 KY065490_p26 hypothetical protein phrog_236 nucleotide kinase other 1 11821 12063
APD23738.1 KY065490_p1 integrase phrog_1 integrase integration and excision -1 1 1137
APD23783.1 KY065490_p46 tail protein phrog_202 distal tail protein Dit tail 1 27498 29012
APD23762.1 KY065490_p25 hypothetical protein phrog_98 unknown function unknown function 1 11342 11761
APD23788.1 KY065490_p51 LL-H family holin phrog_608 holin lysis 1 35513 35845
APD23766.1 KY065490_p29 hypothetical protein phrog_5057 unknown function unknown function 1 13593 14339