| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065491 |
Definition |
Streptococcus phage IPP53, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
37235 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
38.27 |
Number of singletons |
6 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD23819.1 | KY065491_p30 | hypothetical protein | phrog_2412 | unknown function | unknown function | 1 | 15001 | 15300 |
| APD23794.1 | KY065491_p5 | repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2027 | 2383 |
| APD23810.1 | KY065491_p21 | holliday junction resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10030 | 10380 |
| APD23829.1 | KY065491_p40 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 22519 | 22926 |
| APD23795.1 | KY065491_p6 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2650 | 2844 |
| APD23790.1 | KY065491_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1137 |
| APD23798.1 | KY065491_p9 | hypothetical protein | phrog_9136 | unknown function | unknown function | -1 | 3804 | 4040 |
| APD23801.1 | KY065491_p12 | hypothetical protein | phrog_2715 | unknown function | unknown function | 1 | 5113 | 5565 |
| APD23827.1 | KY065491_p38 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 21423 | 21815 |
| APD23828.1 | KY065491_p39 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 22175 | 22519 |
| APD23818.1 | KY065491_p29 | hypothetical protein | phrog_5057 | unknown function | unknown function | 1 | 13896 | 14642 |
| APD23804.1 | KY065491_p15 | hypothetical protein | phrog_4139 | unknown function | unknown function | 1 | 7289 | 7465 |
| APD23823.1 | KY065491_p34 | minor capsid protein 2 | phrog_581 | minor head protein | head and packaging | 1 | 18381 | 19535 |
| APD23844.1 | KY065491_p55 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 36462 | 37235 |
| APD23831.1 | KY065491_p42 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 23437 | 23925 |
| APD23808.1 | KY065491_p19 | hypothetical protein | phrog_16580 | unknown function | unknown function | 1 | 9542 | 9739 |
| APD23824.1 | KY065491_p35 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 19674 | 20237 |
| APD23837.1 | KY065491_p48 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 27775 | 29289 |
| APD23805.1 | KY065491_p16 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7455 | 8030 |
| APD23830.1 | KY065491_p41 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 22923 | 23372 |
| APD23807.1 | KY065491_p18 | hypothetical protein | phrog_3947 | unknown function | unknown function | 1 | 9329 | 9532 |
| APD23792.1 | KY065491_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1420 | 1611 |
| APD23843.1 | KY065491_p54 | LL-H family holin | phrog_608 | holin | lysis | 1 | 35944 | 36276 |
| APD23802.1 | KY065491_p13 | single-strand DNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5571 | 6272 |
| APD23839.1 | KY065491_p50 | minor structural protein | singleton | unknown function | unknown function | 1 | 32866 | 33102 |
| APD23811.1 | KY065491_p22 | hypothetical protein | phrog_4706 | unknown function | unknown function | 1 | 10382 | 10588 |
| APD23826.1 | KY065491_p37 | hypothetical protein | phrog_2910 | unknown function | unknown function | 1 | 21147 | 21380 |
| APD23821.1 | KY065491_p32 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 16665 | 18182 |
| APD23842.1 | KY065491_p53 | holin 1 | phrog_199 | holin | lysis | 1 | 35524 | 35940 |
| APD23791.1 | KY065491_p2 | hypothetical protein | phrog_3845 | unknown function | unknown function | -1 | 1262 | 1423 |
| APD23820.1 | KY065491_p31 | PBSX family terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 15365 | 16600 |
| APD23806.1 | KY065491_p17 | type II DNA modification methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 8056 | 9294 |
| APD23809.1 | KY065491_p20 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 9756 | 9968 |
| APD23796.1 | KY065491_p7 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 2846 | 3544 |
| APD23833.1 | KY065491_p44 | hypothetical protein | phrog_7972 | unknown function | unknown function | 1 | 24500 | 25531 |
| APD23836.1 | KY065491_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27038 | 27778 |
| APD23797.1 | KY065491_p8 | hypothetical protein | phrog_5868 | unknown function | unknown function | 1 | 3609 | 3875 |
| APD23799.1 | KY065491_p10 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4220 | 4606 |
| APD23832.1 | KY065491_p43 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 23944 | 24507 |
| APD23813.1 | KY065491_p24 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 10941 | 11471 |
| APD23800.1 | KY065491_p11 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4763 | 5029 |
| APD23817.1 | KY065491_p28 | ParB-like protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 12821 | 13915 |
| APD23815.1 | KY065491_p26 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 12072 | 12365 |
| APD23816.1 | KY065491_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12358 | 12561 |
| APD23814.1 | KY065491_p25 | hypothetical protein | phrog_5513 | unknown function | unknown function | 1 | 11472 | 11684 |
| APD23841.1 | KY065491_p52 | hypothetical protein | phrog_2566 | unknown function | unknown function | 1 | 35245 | 35514 |
| APD23838.1 | KY065491_p49 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 29291 | 32785 |
| APD23812.1 | KY065491_p23 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 10637 | 10954 |
| APD23793.1 | KY065491_p4 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1625 | 2005 |
| APD23803.1 | KY065491_p14 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 6275 | 7267 |
| APD23835.1 | KY065491_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26688 | 26999 |
| APD23840.1 | KY065491_p51 | structural protein | phrog_372 | tail protein | tail | 1 | 33113 | 35191 |
| APD23834.1 | KY065491_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25591 | 26706 |
| APD23822.1 | KY065491_p33 | hypothetical protein | phrog_3755 | unknown function | unknown function | 1 | 18136 | 18342 |
| APD23825.1 | KY065491_p36 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 20255 | 21136 |