Genomic map of Streptococcus phage IPP54 (KY065492)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065492
Definition
Streptococcus phage IPP54, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
38900
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
38.37
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23859.1 KY065492_p15 hypothetical protein phrog_4139 unknown function unknown function 1 7647 7823
APD23880.1 KY065492_p36 hypothetical protein phrog_3755 unknown function unknown function 1 19643 19849
APD23861.1 KY065492_p17 type II DNA modification methyltransferase phrog_363 DNA methyltransferase other 1 8384 9166
APD23877.1 KY065492_p33 hypothetical protein phrog_2412 unknown function unknown function 1 16335 16808
APD23869.1 KY065492_p25 holliday junction resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 12124 12474
APD23870.1 KY065492_p26 hypothetical protein phrog_4706 unknown function unknown function 1 12476 12682
APD23847.1 KY065492_p3 hypothetical protein phrog_87 metallo-protease other -1 1780 2160
APD23898.1 KY065492_p54 LL-H family holin phrog_608 holin lysis 1 37608 37940
APD23849.1 KY065492_p5 repressor phrog_3 transcriptional repressor transcription regulation 1 2805 2999
APD23879.1 KY065492_p35 minor capsid protein phrog_533 portal protein head and packaging 1 18172 19689
APD23867.1 KY065492_p23 hypothetical protein phrog_1029 unknown function unknown function 1 11096 11833
APD23853.1 KY065492_p9 replication protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 4375 4641
APD23855.1 KY065492_p11 transcriptional repressor phrog_3 transcriptional repressor transcription regulation 1 5220 5453
APD23845.1 KY065492_p1 integrase phrog_1 integrase integration and excision -1 1 1122
APD23873.1 KY065492_p29 hypothetical protein phrog_2003 unknown function unknown function 1 13577 13870
APD23868.1 KY065492_p24 hypothetical protein phrog_774 unknown function unknown function 1 11850 12062
APD23865.1 KY065492_p21 adenine-specific methyltransferase phrog_67 DNA methyltransferase other 1 9896 10645
APD23858.1 KY065492_p14 hypothetical protein phrog_674 unknown function unknown function 1 6633 7625
APD23885.1 KY065492_p41 hypothetical protein phrog_541 head-tail adaptor connector 1 22931 23323
APD23860.1 KY065492_p16 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7813 8358
APD23866.1 KY065492_p22 hypothetical protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism 1 10660 11094
APD23878.1 KY065492_p34 PBSX family terminase large subunit phrog_2 terminase large subunit head and packaging 1 16873 18108
APD23897.1 KY065492_p53 holin 1 phrog_199 holin lysis 1 37188 37604
APD23893.1 KY065492_p49 tail protein phrog_202 distal tail protein Dit tail 1 29308 30822
APD23882.1 KY065492_p38 minor structural protein phrog_194 head scaffolding protein head and packaging 1 21182 21745
APD23854.1 KY065492_p10 hypothetical protein phrog_2273 unknown function unknown function 1 4873 5139
APD23884.1 KY065492_p40 hypothetical protein phrog_2910 unknown function unknown function 1 22655 22888
APD23895.1 KY065492_p51 structural protein phrog_372 tail protein tail 1 34777 36855
APD23846.1 KY065492_p2 hypothetical protein phrog_5214 unknown function unknown function -1 1247 1762
APD23862.1 KY065492_p18 DNA methylase phrog_16427 DNA methyltransferase other 1 9154 9522
APD23871.1 KY065492_p27 hypothetical protein phrog_834 unknown function unknown function 1 12731 13048
APD23887.1 KY065492_p43 minor capsid protein phrog_556 minor head protein head and packaging 1 23684 24028
APD23851.1 KY065492_p7 hypothetical protein phrog_5868 unknown function unknown function 1 3764 4030
APD23852.1 KY065492_p8 hypothetical protein phrog_9136 unknown function unknown function -1 3959 4195
APD23889.1 KY065492_p45 major tail shaft protein phrog_820 major tail protein tail 1 24432 24881
APD23886.1 KY065492_p42 minor capsid protein 2 phrog_793 head-tail adaptor connector 1 23313 23684
APD23863.1 KY065492_p19 hypothetical protein phrog_3947 unknown function unknown function 1 9557 9760
APD23883.1 KY065492_p39 major capsid protein phrog_840 major head protein head and packaging 1 21763 22644
APD23874.1 KY065492_p30 hypothetical protein phrog_3511 unknown function unknown function 1 13870 14262
APD23891.1 KY065492_p47 hypothetical protein phrog_706 unknown function unknown function 1 25453 26016
APD23890.1 KY065492_p46 hypothetical protein phrog_1061 unknown function unknown function 1 24946 25434
APD23850.1 KY065492_p6 antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 3001 3699
APD23864.1 KY065492_p20 DNA-binding protein phrog_36984 DNA binding protein DNA, RNA and nucleotide metabolism 1 9757 9906
APD23894.1 KY065492_p50 antireceptor phrog_588 tail fiber protein and host specificity tail 1 30803 34765
APD23856.1 KY065492_p12 hypothetical protein phrog_847 anti-repressor Ant transcription regulation 1 5465 5935
APD23872.1 KY065492_p28 hypothetical protein phrog_121 unknown function unknown function 1 13050 13577
APD23888.1 KY065492_p44 minor capsid protein phrog_913 minor head protein head and packaging 1 24028 24435
APD23857.1 KY065492_p13 single-strand DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5920 6630
APD23875.1 KY065492_p31 ParB-like protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 14328 15422
APD23892.1 KY065492_p48 hypothetical protein phrog_1686 tail length tape measure protein tail 1 26009 29311
APD23881.1 KY065492_p37 minor capsid protein 2 phrog_581 minor head protein head and packaging 1 19892 21043
APD23899.1 KY065492_p55 lytic amidase phrog_1110 endolysin lysis 1 37944 38900
APD23876.1 KY065492_p32 hypothetical protein phrog_5057 unknown function unknown function 1 15403 16149
APD23896.1 KY065492_p52 hypothetical protein phrog_2566 unknown function unknown function 1 36909 37178
APD23848.1 KY065492_p4 repressor protein phrog_8 transcriptional regulator transcription regulation -1 2182 2538