| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065492 |
Definition |
Streptococcus phage IPP54, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
38900 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
38.37 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD23859.1 | KY065492_p15 | hypothetical protein | phrog_4139 | unknown function | unknown function | 1 | 7647 | 7823 |
| APD23880.1 | KY065492_p36 | hypothetical protein | phrog_3755 | unknown function | unknown function | 1 | 19643 | 19849 |
| APD23861.1 | KY065492_p17 | type II DNA modification methyltransferase | phrog_363 | DNA methyltransferase | other | 1 | 8384 | 9166 |
| APD23877.1 | KY065492_p33 | hypothetical protein | phrog_2412 | unknown function | unknown function | 1 | 16335 | 16808 |
| APD23869.1 | KY065492_p25 | holliday junction resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 12124 | 12474 |
| APD23870.1 | KY065492_p26 | hypothetical protein | phrog_4706 | unknown function | unknown function | 1 | 12476 | 12682 |
| APD23847.1 | KY065492_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1780 | 2160 |
| APD23898.1 | KY065492_p54 | LL-H family holin | phrog_608 | holin | lysis | 1 | 37608 | 37940 |
| APD23849.1 | KY065492_p5 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2805 | 2999 |
| APD23879.1 | KY065492_p35 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 18172 | 19689 |
| APD23867.1 | KY065492_p23 | hypothetical protein | phrog_1029 | unknown function | unknown function | 1 | 11096 | 11833 |
| APD23853.1 | KY065492_p9 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4375 | 4641 |
| APD23855.1 | KY065492_p11 | transcriptional repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 5220 | 5453 |
| APD23845.1 | KY065492_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1122 |
| APD23873.1 | KY065492_p29 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 13577 | 13870 |
| APD23868.1 | KY065492_p24 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 11850 | 12062 |
| APD23865.1 | KY065492_p21 | adenine-specific methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 9896 | 10645 |
| APD23858.1 | KY065492_p14 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 6633 | 7625 |
| APD23885.1 | KY065492_p41 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 22931 | 23323 |
| APD23860.1 | KY065492_p16 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7813 | 8358 |
| APD23866.1 | KY065492_p22 | hypothetical protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | 1 | 10660 | 11094 |
| APD23878.1 | KY065492_p34 | PBSX family terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 16873 | 18108 |
| APD23897.1 | KY065492_p53 | holin 1 | phrog_199 | holin | lysis | 1 | 37188 | 37604 |
| APD23893.1 | KY065492_p49 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 29308 | 30822 |
| APD23882.1 | KY065492_p38 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 21182 | 21745 |
| APD23854.1 | KY065492_p10 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4873 | 5139 |
| APD23884.1 | KY065492_p40 | hypothetical protein | phrog_2910 | unknown function | unknown function | 1 | 22655 | 22888 |
| APD23895.1 | KY065492_p51 | structural protein | phrog_372 | tail protein | tail | 1 | 34777 | 36855 |
| APD23846.1 | KY065492_p2 | hypothetical protein | phrog_5214 | unknown function | unknown function | -1 | 1247 | 1762 |
| APD23862.1 | KY065492_p18 | DNA methylase | phrog_16427 | DNA methyltransferase | other | 1 | 9154 | 9522 |
| APD23871.1 | KY065492_p27 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 12731 | 13048 |
| APD23887.1 | KY065492_p43 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 23684 | 24028 |
| APD23851.1 | KY065492_p7 | hypothetical protein | phrog_5868 | unknown function | unknown function | 1 | 3764 | 4030 |
| APD23852.1 | KY065492_p8 | hypothetical protein | phrog_9136 | unknown function | unknown function | -1 | 3959 | 4195 |
| APD23889.1 | KY065492_p45 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 24432 | 24881 |
| APD23886.1 | KY065492_p42 | minor capsid protein 2 | phrog_793 | head-tail adaptor | connector | 1 | 23313 | 23684 |
| APD23863.1 | KY065492_p19 | hypothetical protein | phrog_3947 | unknown function | unknown function | 1 | 9557 | 9760 |
| APD23883.1 | KY065492_p39 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 21763 | 22644 |
| APD23874.1 | KY065492_p30 | hypothetical protein | phrog_3511 | unknown function | unknown function | 1 | 13870 | 14262 |
| APD23891.1 | KY065492_p47 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 25453 | 26016 |
| APD23890.1 | KY065492_p46 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 24946 | 25434 |
| APD23850.1 | KY065492_p6 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 3001 | 3699 |
| APD23864.1 | KY065492_p20 | DNA-binding protein | phrog_36984 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9757 | 9906 |
| APD23894.1 | KY065492_p50 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 30803 | 34765 |
| APD23856.1 | KY065492_p12 | hypothetical protein | phrog_847 | anti-repressor Ant | transcription regulation | 1 | 5465 | 5935 |
| APD23872.1 | KY065492_p28 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 13050 | 13577 |
| APD23888.1 | KY065492_p44 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 24028 | 24435 |
| APD23857.1 | KY065492_p13 | single-strand DNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5920 | 6630 |
| APD23875.1 | KY065492_p31 | ParB-like protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 14328 | 15422 |
| APD23892.1 | KY065492_p48 | hypothetical protein | phrog_1686 | tail length tape measure protein | tail | 1 | 26009 | 29311 |
| APD23881.1 | KY065492_p37 | minor capsid protein 2 | phrog_581 | minor head protein | head and packaging | 1 | 19892 | 21043 |
| APD23899.1 | KY065492_p55 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 37944 | 38900 |
| APD23876.1 | KY065492_p32 | hypothetical protein | phrog_5057 | unknown function | unknown function | 1 | 15403 | 16149 |
| APD23896.1 | KY065492_p52 | hypothetical protein | phrog_2566 | unknown function | unknown function | 1 | 36909 | 37178 |
| APD23848.1 | KY065492_p4 | repressor protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2182 | 2538 |