Genomic map of Streptococcus phage IPP55 (KY065493)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065493
Definition
Streptococcus phage IPP55, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
37847
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
38.7
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD23924.1 KY065493_p25 hypothetical protein phrog_5057 unknown function unknown function 1 13219 13965
APD23900.1 KY065493_p1 integrase phrog_1 integrase integration and excision -1 1 1122
APD23906.1 KY065493_p7 replication protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 4257 4598
APD23918.1 KY065493_p19 holliday junction resolvase phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10190 10540
APD23901.1 KY065493_p2 hypothetical protein phrog_5214 unknown function unknown function -1 1245 1760
APD23929.1 KY065493_p30 minor capsid protein 2 phrog_581 minor head protein head and packaging 1 17708 18859
APD23911.1 KY065493_p12 hypothetical protein phrog_4139 unknown function unknown function 1 7280 7456
APD23927.1 KY065493_p28 minor capsid protein phrog_533 portal protein head and packaging 1 15988 17505
APD23942.1 KY065493_p43 platelet-binding phage protein phrog_588 tail fiber protein and host specificity tail 1 28619 33712
APD23936.1 KY065493_p37 minor capsid protein phrog_913 minor head protein head and packaging 1 21844 22251
APD23923.1 KY065493_p24 ParB-like protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 12144 13238
APD23939.1 KY065493_p40 hypothetical protein phrog_706 unknown function unknown function 1 23269 23832
APD23928.1 KY065493_p29 hypothetical protein phrog_3755 unknown function unknown function 1 17459 17665
APD23935.1 KY065493_p36 minor capsid protein phrog_556 minor head protein head and packaging 1 21500 21844
APD23905.1 KY065493_p6 antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 3364 4071
APD23930.1 KY065493_p31 minor structural protein phrog_194 head scaffolding protein head and packaging 1 18998 19561
APD23917.1 KY065493_p18 hypothetical protein phrog_774 unknown function unknown function 1 9916 10128
APD23908.1 KY065493_p9 hypothetical protein phrog_2715 unknown function unknown function 1 5104 5556
APD23933.1 KY065493_p34 hypothetical protein phrog_541 head-tail adaptor connector 1 20747 21139
APD23931.1 KY065493_p32 major capsid protein phrog_840 major head protein head and packaging 1 19579 20460
APD23947.1 KY065493_p48 lytic amidase phrog_1110 endolysin lysis 1 37074 37847
APD23922.1 KY065493_p23 hypothetical protein phrog_3511 unknown function unknown function 1 11686 12078
APD23916.1 KY065493_p17 hypothetical protein phrog_16580 unknown function unknown function 1 9702 9899
APD23946.1 KY065493_p47 LL-H family holin phrog_608 holin lysis 1 36555 36887
APD23910.1 KY065493_p11 hypothetical protein phrog_674 unknown function unknown function 1 6266 7258
APD23919.1 KY065493_p20 hypothetical protein phrog_4706 unknown function unknown function 1 10542 10748
APD23940.1 KY065493_p41 hypothetical protein phrog_1686 tail length tape measure protein tail 1 23825 27127
APD23938.1 KY065493_p39 hypothetical protein phrog_1061 unknown function unknown function 1 22762 23250
APD23902.1 KY065493_p3 hypothetical protein phrog_87 metallo-protease other -1 1778 2158
APD23904.1 KY065493_p5 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3143 3352
APD23912.1 KY065493_p13 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7446 7991
APD23944.1 KY065493_p45 hypothetical protein phrog_2566 unknown function unknown function 1 35856 36125
APD23907.1 KY065493_p8 hypothetical protein phrog_2273 unknown function unknown function 1 4755 5021
APD23909.1 KY065493_p10 single-strand DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5562 6263
APD23941.1 KY065493_p42 tail protein phrog_202 distal tail protein Dit tail 1 27124 28638
APD23925.1 KY065493_p26 hypothetical protein phrog_2412 unknown function unknown function 1 14151 14624
APD23937.1 KY065493_p38 major tail shaft protein phrog_820 major tail protein tail 1 22248 22697
APD23926.1 KY065493_p27 PBSX family terminase large subunit phrog_2 terminase large subunit head and packaging 1 14689 15924
APD23913.1 KY065493_p14 hypothetical protein phrog_8736 unknown function unknown function 1 8005 8289
APD23945.1 KY065493_p46 holin 1 phrog_199 holin lysis 1 36135 36551
APD23915.1 KY065493_p16 hypothetical protein phrog_3947 unknown function unknown function 1 9489 9692
APD23921.1 KY065493_p22 hypothetical protein phrog_121 unknown function unknown function 1 11114 11686
APD23903.1 KY065493_p4 DNA-binding protein phrog_8 transcriptional regulator transcription regulation -1 2180 2569
APD23932.1 KY065493_p33 hypothetical protein phrog_2910 unknown function unknown function 1 20471 20704
APD23920.1 KY065493_p21 hypothetical protein phrog_834 unknown function unknown function 1 10798 11112
APD23914.1 KY065493_p15 type II DNA modification methyltransferase phrog_116 DNA methyltransferase other 1 8303 9445
APD23943.1 KY065493_p44 structural protein phrog_372 tail protein tail 1 33724 35802
APD23934.1 KY065493_p35 minor capsid protein 2 phrog_793 head-tail adaptor connector 1 21129 21500