| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065493 |
Definition |
Streptococcus phage IPP55, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
37847 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
38.7 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD23924.1 | KY065493_p25 | hypothetical protein | phrog_5057 | unknown function | unknown function | 1 | 13219 | 13965 |
| APD23900.1 | KY065493_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1122 |
| APD23906.1 | KY065493_p7 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4257 | 4598 |
| APD23918.1 | KY065493_p19 | holliday junction resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10190 | 10540 |
| APD23901.1 | KY065493_p2 | hypothetical protein | phrog_5214 | unknown function | unknown function | -1 | 1245 | 1760 |
| APD23929.1 | KY065493_p30 | minor capsid protein 2 | phrog_581 | minor head protein | head and packaging | 1 | 17708 | 18859 |
| APD23911.1 | KY065493_p12 | hypothetical protein | phrog_4139 | unknown function | unknown function | 1 | 7280 | 7456 |
| APD23927.1 | KY065493_p28 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 15988 | 17505 |
| APD23942.1 | KY065493_p43 | platelet-binding phage protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 28619 | 33712 |
| APD23936.1 | KY065493_p37 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 21844 | 22251 |
| APD23923.1 | KY065493_p24 | ParB-like protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 12144 | 13238 |
| APD23939.1 | KY065493_p40 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 23269 | 23832 |
| APD23928.1 | KY065493_p29 | hypothetical protein | phrog_3755 | unknown function | unknown function | 1 | 17459 | 17665 |
| APD23935.1 | KY065493_p36 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 21500 | 21844 |
| APD23905.1 | KY065493_p6 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 3364 | 4071 |
| APD23930.1 | KY065493_p31 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 18998 | 19561 |
| APD23917.1 | KY065493_p18 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 9916 | 10128 |
| APD23908.1 | KY065493_p9 | hypothetical protein | phrog_2715 | unknown function | unknown function | 1 | 5104 | 5556 |
| APD23933.1 | KY065493_p34 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 20747 | 21139 |
| APD23931.1 | KY065493_p32 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 19579 | 20460 |
| APD23947.1 | KY065493_p48 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 37074 | 37847 |
| APD23922.1 | KY065493_p23 | hypothetical protein | phrog_3511 | unknown function | unknown function | 1 | 11686 | 12078 |
| APD23916.1 | KY065493_p17 | hypothetical protein | phrog_16580 | unknown function | unknown function | 1 | 9702 | 9899 |
| APD23946.1 | KY065493_p47 | LL-H family holin | phrog_608 | holin | lysis | 1 | 36555 | 36887 |
| APD23910.1 | KY065493_p11 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 6266 | 7258 |
| APD23919.1 | KY065493_p20 | hypothetical protein | phrog_4706 | unknown function | unknown function | 1 | 10542 | 10748 |
| APD23940.1 | KY065493_p41 | hypothetical protein | phrog_1686 | tail length tape measure protein | tail | 1 | 23825 | 27127 |
| APD23938.1 | KY065493_p39 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 22762 | 23250 |
| APD23902.1 | KY065493_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1778 | 2158 |
| APD23904.1 | KY065493_p5 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3143 | 3352 |
| APD23912.1 | KY065493_p13 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7446 | 7991 |
| APD23944.1 | KY065493_p45 | hypothetical protein | phrog_2566 | unknown function | unknown function | 1 | 35856 | 36125 |
| APD23907.1 | KY065493_p8 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4755 | 5021 |
| APD23909.1 | KY065493_p10 | single-strand DNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5562 | 6263 |
| APD23941.1 | KY065493_p42 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 27124 | 28638 |
| APD23925.1 | KY065493_p26 | hypothetical protein | phrog_2412 | unknown function | unknown function | 1 | 14151 | 14624 |
| APD23937.1 | KY065493_p38 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 22248 | 22697 |
| APD23926.1 | KY065493_p27 | PBSX family terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 14689 | 15924 |
| APD23913.1 | KY065493_p14 | hypothetical protein | phrog_8736 | unknown function | unknown function | 1 | 8005 | 8289 |
| APD23945.1 | KY065493_p46 | holin 1 | phrog_199 | holin | lysis | 1 | 36135 | 36551 |
| APD23915.1 | KY065493_p16 | hypothetical protein | phrog_3947 | unknown function | unknown function | 1 | 9489 | 9692 |
| APD23921.1 | KY065493_p22 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 11114 | 11686 |
| APD23903.1 | KY065493_p4 | DNA-binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2180 | 2569 |
| APD23932.1 | KY065493_p33 | hypothetical protein | phrog_2910 | unknown function | unknown function | 1 | 20471 | 20704 |
| APD23920.1 | KY065493_p21 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 10798 | 11112 |
| APD23914.1 | KY065493_p15 | type II DNA modification methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 8303 | 9445 |
| APD23943.1 | KY065493_p44 | structural protein | phrog_372 | tail protein | tail | 1 | 33724 | 35802 |
| APD23934.1 | KY065493_p35 | minor capsid protein 2 | phrog_793 | head-tail adaptor | connector | 1 | 21129 | 21500 |