| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065496 |
Definition |
Streptococcus phage IPP60, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
41977 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
40.11 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD24057.1 | KY065496_p10 | hypothetical protein | phrog_3873 | unknown function | unknown function | -1 | 3958 | 4179 |
| APD24059.1 | KY065496_p12 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 4522 | 4749 |
| APD24092.1 | KY065496_p45 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 24021 | 24530 |
| APD24093.1 | KY065496_p46 | carbohydrate-binding family V/XII protein | phrog_422 | major head protein | head and packaging | 1 | 24553 | 25578 |
| APD24052.1 | KY065496_p5 | transcriptional regulator, Cro/CI family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2578 | 2931 |
| APD24072.1 | KY065496_p25 | hypothetical protein | phrog_13710 | unknown function | unknown function | 1 | 10738 | 10842 |
| APD24110.1 | KY065496_p63 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 41021 | 41977 |
| APD24100.1 | KY065496_p53 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 27684 | 28064 |
| APD24101.1 | KY065496_p54 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 28103 | 28453 |
| APD24060.1 | KY065496_p13 | hypothetical protein | phrog_2648 | unknown function | unknown function | 1 | 4791 | 4985 |
| APD24099.1 | KY065496_p52 | major tail protein | phrog_158 | major tail protein | tail | 1 | 27266 | 27679 |
| APD24054.1 | KY065496_p7 | hypothetical protein | phrog_7607 | unknown function | unknown function | -1 | 3349 | 3588 |
| APD24050.1 | KY065496_p3 | hypothetical protein | phrog_6701 | unknown function | unknown function | -1 | 1671 | 2150 |
| APD24090.1 | KY065496_p43 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 23302 | 23565 |
| APD24053.1 | KY065496_p6 | hypothetical protein | phrog_6987 | unknown function | unknown function | 1 | 3231 | 3431 |
| APD24105.1 | KY065496_p58 | hypothetical protein | phrog_4793 | unknown function | unknown function | 1 | 39602 | 39718 |
| APD24103.1 | KY065496_p56 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 32042 | 32392 |
| APD24108.1 | KY065496_p61 | holin 1 | phrog_199 | holin | lysis | 1 | 40265 | 40681 |
| APD24069.1 | KY065496_p22 | hypothetical protein | phrog_2486 | unknown function | unknown function | 1 | 8987 | 9304 |
| APD24109.1 | KY065496_p62 | LL-H family holin | phrog_608 | holin | lysis | 1 | 40685 | 41017 |
| APD24096.1 | KY065496_p49 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 26070 | 26408 |
| APD24064.1 | KY065496_p17 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 5729 | 6493 |
| APD24068.1 | KY065496_p21 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 7775 | 8968 |
| APD24077.1 | KY065496_p30 | hypothetical protein | phrog_3606 | unknown function | unknown function | 1 | 13783 | 13932 |
| APD24065.1 | KY065496_p18 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 6486 | 6968 |
| APD24058.1 | KY065496_p11 | hypothetical protein | phrog_2317 | unknown function | unknown function | 1 | 4297 | 4440 |
| APD24075.1 | KY065496_p28 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 13291 | 13443 |
| APD24104.1 | KY065496_p57 | PblB | phrog_1210 | PblB-type receptor binding | other | 1 | 32397 | 39605 |
| APD24062.1 | KY065496_p15 | hypothetical protein | phrog_633 | transcriptional regulator | transcription regulation | 1 | 5185 | 5526 |
| APD24095.1 | KY065496_p48 | head-tail connector protein | phrog_132 | head-tail adaptor | connector | 1 | 25778 | 26089 |
| APD24106.1 | KY065496_p59 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 39699 | 39902 |
| APD24089.1 | KY065496_p42 | metal dependent phosphohydrolase, HD region | phrog_990 | metal-dependent phosphohydrolase | other | 1 | 22846 | 23259 |
| APD24067.1 | KY065496_p20 | hypothetical protein | phrog_1981 | unknown function | unknown function | 1 | 7327 | 7812 |
| APD24087.1 | KY065496_p40 | head morphogenesis protein | phrog_2841 | minor head protein | head and packaging | 1 | 21055 | 22638 |
| APD24082.1 | KY065496_p35 | AbrB family transcriptional regulator | phrog_9969 | transcriptional regulator | transcription regulation | -1 | 15783 | 15998 |
| APD24051.1 | KY065496_p4 | hypothetical protein | phrog_10787 | unknown function | unknown function | -1 | 2154 | 2576 |
| APD24078.1 | KY065496_p31 | hypothetical protein | phrog_834 | unknown function | unknown function | 1 | 13932 | 14246 |
| APD24080.1 | KY065496_p33 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 14940 | 15425 |
| APD24063.1 | KY065496_p16 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 5527 | 5757 |
| APD24073.1 | KY065496_p26 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 10830 | 11651 |
| APD24084.1 | KY065496_p37 | small subunit of the terminase | phrog_51 | terminase small subunit | head and packaging | 1 | 17913 | 18407 |
| APD24107.1 | KY065496_p60 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 39905 | 40255 |
| APD24102.1 | KY065496_p55 | tail length tape-measure protein | phrog_1535 | tail length tape measure protein | tail | 1 | 28440 | 32033 |
| APD24061.1 | KY065496_p14 | hypothetical protein | phrog_5054 | unknown function | unknown function | 1 | 4982 | 5173 |
| APD24091.1 | KY065496_p44 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 23567 | 23818 |
| APD24048.1 | KY065496_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1128 |
| APD24066.1 | KY065496_p19 | hypothetical protein | phrog_1341 | unknown function | unknown function | 1 | 6968 | 7327 |
| APD24055.1 | KY065496_p8 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3653 | 3844 |
| APD24097.1 | KY065496_p50 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26383 | 26898 |
| APD24071.1 | KY065496_p24 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 10151 | 10657 |
| APD24074.1 | KY065496_p27 | hypothetical protein | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 11654 | 12997 |
| APD24086.1 | KY065496_p39 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 19623 | 21092 |
| APD24081.1 | KY065496_p34 | transcriptional regulator | phrog_1936 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 15446 | 15799 |
| APD24083.1 | KY065496_p36 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 16128 | 16556 |
| APD24088.1 | KY065496_p41 | hypothetical protein | phrog_3514 | unknown function | unknown function | 1 | 22640 | 22849 |
| APD24056.1 | KY065496_p9 | hypothetical protein | phrog_4194 | unknown function | unknown function | 1 | 3867 | 4004 |
| APD24094.1 | KY065496_p47 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 25588 | 25776 |
| APD24049.1 | KY065496_p2 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1270 | 1650 |
| APD24079.1 | KY065496_p32 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 14248 | 14943 |
| APD24098.1 | KY065496_p51 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 26895 | 27263 |
| APD24076.1 | KY065496_p29 | hypothetical protein | phrog_4019 | unknown function | unknown function | 1 | 13443 | 13781 |
| APD24070.1 | KY065496_p23 | NTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9304 | 10131 |
| APD24085.1 | KY065496_p38 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 18397 | 19611 |