Genomic map of Streptococcus phage IPP62 (KY065498)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY065498
Definition
Streptococcus phage IPP62, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
39369
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
40.84
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD24227.1 KY065498_p35 hypothetical protein phrog_2343 terminase small subunit head and packaging 1 14078 14416
APD24202.1 KY065498_p10 hypothetical protein phrog_463 anti-repressor transcription regulation 1 4199 4957
APD24231.1 KY065498_p39 capsid family protein phrog_10 major head protein head and packaging 1 17980 19095
APD24220.1 KY065498_p28 type II DNA modification methyltransferase phrog_116 DNA methyltransferase other 1 10632 11714
APD24241.1 KY065498_p49 tail protein phrog_1293 tail length tape measure protein tail 1 22218 26393
APD24194.1 KY065498_p2 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 1328 2251
APD24234.1 KY065498_p42 hypothetical protein phrog_25 head closure Hc1 connector 1 19567 19956
APD24196.1 KY065498_p4 DNA binding protein phrog_8 transcriptional regulator transcription regulation -1 2660 3022
APD24233.1 KY065498_p41 hypothetical protein phrog_933 unknown function unknown function 1 19392 19580
APD24238.1 KY065498_p46 hypothetical protein phrog_187 head-tail adaptor connector 1 21389 21682
APD24211.1 KY065498_p19 hypothetical protein phrog_11897 unknown function unknown function 1 8075 8380
APD24209.1 KY065498_p17 hypothetical protein phrog_1580 unknown function unknown function 1 7663 7857
APD24200.1 KY065498_p8 DNA binding protein phrog_1468 transcriptional repressor transcription regulation 1 3898 4101
APD24229.1 KY065498_p37 portal protein phrog_12 portal protein head and packaging 1 16110 17258
APD24203.1 KY065498_p11 hypothetical protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 4970 5227
APD24221.1 KY065498_p29 DNA-binding protein phrog_14932 DNA binding protein DNA, RNA and nucleotide metabolism 1 11711 11818
APD24243.1 KY065498_p51 PblB phrog_1210 PblB-type receptor binding other 1 27088 36996
APD24226.1 KY065498_p34 endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13664 13960
APD24242.1 KY065498_p50 hypothetical protein phrog_33 distal tail protein Dit tail 1 26393 27091
APD24219.1 KY065498_p27 hypothetical protein phrog_884 unknown function unknown function 1 10375 10635
APD24235.1 KY065498_p43 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 19949 20347
APD24218.1 KY065498_p26 hypothetical protein phrog_4252 unknown function unknown function 1 10217 10378
APD24214.1 KY065498_p22 hypothetical protein phrog_1638 unknown function unknown function 1 8625 8834
APD24223.1 KY065498_p31 RNA polymerase ECF family sigma factor phrog_36 transcriptional regulator transcription regulation 1 12217 12642
APD24236.1 KY065498_p44 hypothetical protein phrog_78 tail terminator connector 1 20347 20727
APD24208.1 KY065498_p16 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 6878 7648
APD24225.1 KY065498_p33 hypothetical protein phrog_9423 unknown function unknown function 1 13461 13667
APD24193.1 KY065498_p1 integrase phrog_1 integrase integration and excision -1 1 1149
APD24210.1 KY065498_p18 hypothetical protein phrog_1174 unknown function unknown function 1 7857 8075
APD24204.1 KY065498_p12 lipoprotein phrog_1490 lipoprotein other 1 5313 5633
APD24201.1 KY065498_p9 hypothetical protein phrog_8322 unknown function unknown function 1 4113 4247
APD24207.1 KY065498_p15 hypothetical protein phrog_2108 unknown function unknown function 1 6726 6884
APD24195.1 KY065498_p3 hypothetical protein phrog_87 metallo-protease other -1 2264 2647
APD24246.1 KY065498_p54 holin 1 phrog_199 holin lysis 1 37657 38073
APD24198.1 KY065498_p6 hypothetical protein phrog_3873 unknown function unknown function -1 3400 3621
APD24240.1 KY065498_p48 hypothetical protein phrog_7687 unknown function unknown function 1 21931 22161
APD24222.1 KY065498_p30 hypothetical protein phrog_98 unknown function unknown function 1 11815 12213
APD24232.1 KY065498_p40 hypothetical protein phrog_749 unknown function unknown function 1 19109 19399
APD24230.1 KY065498_p38 clp-protease phrog_94 head maturation protease head and packaging 1 17239 17961
APD24245.1 KY065498_p53 hypothetical protein phrog_1164 unknown function unknown function 1 37297 37647
APD24217.1 KY065498_p25 hypothetical protein phrog_121 unknown function unknown function 1 9630 10217
APD24216.1 KY065498_p24 hypothetical protein phrog_121 unknown function unknown function 1 9125 9637
APD24205.1 KY065498_p13 hypothetical protein phrog_1555 unknown function unknown function 1 5649 5945
APD24228.1 KY065498_p36 terminase large subunit phrog_9 terminase large subunit head and packaging 1 14413 16053
APD24248.1 KY065498_p56 lytic amidase phrog_1110 endolysin lysis 1 38413 39369
APD24239.1 KY065498_p47 hypothetical protein phrog_10068 unknown function unknown function 1 21748 21867
APD24215.1 KY065498_p23 hypothetical protein phrog_834 unknown function unknown function 1 8806 9123
APD24212.1 KY065498_p20 hypothetical protein phrog_5262 unknown function unknown function 1 8373 8465
APD24224.1 KY065498_p32 site-specific recombinase integrase family protein phrog_216 integrase integration and excision 1 12729 13295
APD24206.1 KY065498_p14 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 5929 6738
APD24199.1 KY065498_p7 hypothetical protein phrog_2317 unknown function unknown function 1 3740 3886
APD24197.1 KY065498_p5 hypothetical protein phrog_4194 unknown function unknown function 1 3165 3446
APD24213.1 KY065498_p21 hypothetical protein phrog_1681 unknown function unknown function 1 8471 8638
APD24247.1 KY065498_p55 LL-H family holin phrog_608 holin lysis 1 38077 38409
APD24237.1 KY065498_p45 major tail protein phrog_88 major tail protein tail 1 20744 21340
APD24244.1 KY065498_p52 hypothetical protein phrog_1137 unknown function unknown function 1 37091 37294