| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065501 |
Definition |
Streptococcus phage IPP65, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
39046 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
38.51 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD24397.1 | KY065501_p30 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 16870 | 18387 |
| APD24404.1 | KY065501_p37 | minor capsid protein 2 | phrog_793 | head-tail adaptor | connector | 1 | 22011 | 22382 |
| APD24398.1 | KY065501_p31 | hypothetical protein | phrog_3755 | unknown function | unknown function | 1 | 18341 | 18547 |
| APD24399.1 | KY065501_p32 | minor capsid protein 2 | phrog_581 | minor head protein | head and packaging | 1 | 18590 | 19741 |
| APD24378.1 | KY065501_p11 | single-strand DNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5882 | 6583 |
| APD24368.1 | KY065501_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1122 |
| APD24388.1 | KY065501_p21 | holliday junction resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10945 | 11304 |
| APD24414.1 | KY065501_p47 | hypothetical protein | phrog_2566 | unknown function | unknown function | 1 | 37055 | 37324 |
| APD24405.1 | KY065501_p38 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 22382 | 22726 |
| APD24390.1 | KY065501_p23 | hypothetical protein | phrog_3476 | unknown function | unknown function | 1 | 11883 | 12254 |
| APD24410.1 | KY065501_p43 | hypothetical protein | phrog_1686 | tail length tape measure protein | tail | 1 | 24707 | 27988 |
| APD24376.1 | KY065501_p9 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 5075 | 5341 |
| APD24369.1 | KY065501_p2 | hypothetical protein | phrog_5214 | unknown function | unknown function | -1 | 1245 | 1760 |
| APD24417.1 | KY065501_p50 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 38090 | 39046 |
| APD24387.1 | KY065501_p20 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 10671 | 10883 |
| APD24391.1 | KY065501_p24 | hypothetical protein | phrog_2003 | unknown function | unknown function | 1 | 12275 | 12568 |
| APD24394.1 | KY065501_p27 | hypothetical protein | phrog_5057 | unknown function | unknown function | 1 | 14101 | 14847 |
| APD24402.1 | KY065501_p35 | hypothetical protein | phrog_2910 | unknown function | unknown function | 1 | 21353 | 21586 |
| APD24396.1 | KY065501_p29 | PBSX family terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 15571 | 16806 |
| APD24408.1 | KY065501_p41 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 23644 | 24132 |
| APD24415.1 | KY065501_p48 | holin 1 | phrog_199 | holin | lysis | 1 | 37334 | 37750 |
| APD24395.1 | KY065501_p28 | hypothetical protein | phrog_2412 | unknown function | unknown function | 1 | 15033 | 15506 |
| APD24400.1 | KY065501_p33 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 19880 | 20443 |
| APD24409.1 | KY065501_p42 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 24151 | 24714 |
| APD24373.1 | KY065501_p6 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 3364 | 4071 |
| APD24392.1 | KY065501_p25 | hypothetical protein | phrog_3511 | unknown function | unknown function | 1 | 12568 | 12960 |
| APD24371.1 | KY065501_p4 | DNA-binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2180 | 2569 |
| APD24382.1 | KY065501_p15 | hypothetical protein | phrog_3947 | unknown function | unknown function | 1 | 8378 | 8581 |
| APD24377.1 | KY065501_p10 | hypothetical protein | phrog_2715 | unknown function | unknown function | 1 | 5424 | 5876 |
| APD24406.1 | KY065501_p39 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 22726 | 23133 |
| APD24381.1 | KY065501_p14 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7766 | 8311 |
| APD24411.1 | KY065501_p44 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 27985 | 29499 |
| APD24375.1 | KY065501_p8 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4576 | 4842 |
| APD24380.1 | KY065501_p13 | hypothetical protein | phrog_4139 | unknown function | unknown function | 1 | 7600 | 7776 |
| APD24389.1 | KY065501_p22 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 11297 | 11893 |
| APD24393.1 | KY065501_p26 | ParB-like protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 13026 | 14120 |
| APD24374.1 | KY065501_p7 | hypothetical protein | phrog_5868 | unknown function | unknown function | 1 | 4136 | 4402 |
| APD24372.1 | KY065501_p5 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3143 | 3352 |
| APD24412.1 | KY065501_p45 | platelet-binding phage protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 29501 | 34912 |
| APD24413.1 | KY065501_p46 | structural protein | phrog_372 | tail protein | tail | 1 | 34923 | 37001 |
| APD24383.1 | KY065501_p16 | DNA-binding protein | phrog_36984 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 8578 | 8727 |
| APD24401.1 | KY065501_p34 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 20461 | 21342 |
| APD24385.1 | KY065501_p18 | hypothetical protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | 1 | 9481 | 9915 |
| APD24403.1 | KY065501_p36 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 21629 | 22021 |
| APD24407.1 | KY065501_p40 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 23130 | 23579 |
| APD24384.1 | KY065501_p17 | adenine-specific methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 8717 | 9466 |
| APD24370.1 | KY065501_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1778 | 2158 |
| APD24416.1 | KY065501_p49 | LL-H family holin | phrog_608 | holin | lysis | 1 | 37754 | 38086 |
| APD24386.1 | KY065501_p19 | hypothetical protein | phrog_1029 | unknown function | unknown function | 1 | 9917 | 10654 |
| APD24379.1 | KY065501_p12 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 6586 | 7578 |