| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY065502 |
Definition |
Streptococcus phage IPP66, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
37969 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
37.84 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD24436.1 | KY065502_p19 | hypothetical protein | phrog_774 | unknown function | unknown function | 1 | 10059 | 10271 |
| APD24431.1 | KY065502_p14 | hypothetical protein | phrog_8736 | unknown function | unknown function | 1 | 7533 | 7817 |
| APD24445.1 | KY065502_p28 | hypothetical protein | phrog_5057 | unknown function | unknown function | 1 | 13539 | 14285 |
| APD24443.1 | KY065502_p26 | hypothetical protein | phrog_3511 | unknown function | unknown function | 1 | 12006 | 12398 |
| APD24440.1 | KY065502_p23 | membrane protein | phrog_2169 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 11028 | 11348 |
| APD24442.1 | KY065502_p25 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 11770 | 12009 |
| APD24466.1 | KY065502_p49 | structural protein | phrog_372 | tail protein | tail | 1 | 34188 | 36266 |
| APD24449.1 | KY065502_p32 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 17812 | 18060 |
| APD24458.1 | KY065502_p41 | minor capsid protein | phrog_556 | minor head protein | head and packaging | 1 | 22481 | 22825 |
| APD24430.1 | KY065502_p13 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 6974 | 7519 |
| APD24425.1 | KY065502_p8 | hypothetical protein | phrog_13947 | unknown function | unknown function | 1 | 4053 | 4565 |
| APD24456.1 | KY065502_p39 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 21728 | 22120 |
| APD24460.1 | KY065502_p43 | major tail shaft protein | phrog_820 | major tail protein | tail | 1 | 23229 | 23678 |
| APD24447.1 | KY065502_p30 | PBSX family terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 15009 | 16244 |
| APD24420.1 | KY065502_p3 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 1795 | 2175 |
| APD24459.1 | KY065502_p42 | minor capsid protein | phrog_913 | minor head protein | head and packaging | 1 | 22825 | 23232 |
| APD24469.1 | KY065502_p52 | LL-H family holin | phrog_608 | holin | lysis | 1 | 37019 | 37351 |
| APD24465.1 | KY065502_p48 | antireceptor | phrog_588 | tail fiber protein and host specificity | tail | 1 | 29600 | 34177 |
| APD24451.1 | KY065502_p34 | hypothetical protein | phrog_3755 | unknown function | unknown function | 1 | 18473 | 18646 |
| APD24448.1 | KY065502_p31 | minor capsid protein | phrog_533 | portal protein | head and packaging | 1 | 16308 | 17825 |
| APD24461.1 | KY065502_p44 | hypothetical protein | phrog_1061 | unknown function | unknown function | 1 | 23743 | 24231 |
| APD24426.1 | KY065502_p9 | hypothetical protein | phrog_2715 | unknown function | unknown function | 1 | 4605 | 5081 |
| APD24422.1 | KY065502_p5 | DNA-binding protein | phrog_1337 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 2856 | 3047 |
| APD24419.1 | KY065502_p2 | hypothetical protein | phrog_5214 | unknown function | unknown function | -1 | 1262 | 1777 |
| APD24418.1 | KY065502_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1137 |
| APD24454.1 | KY065502_p37 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 20560 | 21441 |
| APD24463.1 | KY065502_p46 | hypothetical protein | phrog_1686 | tail length tape measure protein | tail | 1 | 24806 | 28108 |
| APD24453.1 | KY065502_p36 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 19979 | 20542 |
| APD24421.1 | KY065502_p4 | DNA-binding protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2197 | 2559 |
| APD24467.1 | KY065502_p50 | hypothetical protein | phrog_2566 | unknown function | unknown function | 1 | 36320 | 36589 |
| APD24424.1 | KY065502_p7 | hypothetical protein | phrog_2273 | unknown function | unknown function | 1 | 3706 | 3972 |
| APD24429.1 | KY065502_p12 | hypothetical protein | phrog_4139 | unknown function | unknown function | 1 | 6808 | 6984 |
| APD24438.1 | KY065502_p21 | hypothetical protein | phrog_4706 | unknown function | unknown function | 1 | 10685 | 10891 |
| APD24462.1 | KY065502_p45 | hypothetical protein | phrog_706 | unknown function | unknown function | 1 | 24250 | 24813 |
| APD24427.1 | KY065502_p10 | single-strand DNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5087 | 5791 |
| APD24457.1 | KY065502_p40 | minor capsid protein 2 | phrog_793 | head-tail adaptor | connector | 1 | 22110 | 22481 |
| APD24433.1 | KY065502_p16 | hypothetical protein | phrog_3947 | unknown function | unknown function | 1 | 8633 | 8815 |
| APD24470.1 | KY065502_p53 | lytic amidase | phrog_1110 | endolysin | lysis | 1 | 37355 | 37969 |
| APD24446.1 | KY065502_p29 | hypothetical protein | phrog_2412 | unknown function | unknown function | 1 | 14471 | 14944 |
| APD24452.1 | KY065502_p35 | minor capsid protein 2 | phrog_581 | minor head protein | head and packaging | 1 | 18689 | 19840 |
| APD24450.1 | KY065502_p33 | hypothetical protein | phrog_3392 | unknown function | unknown function | 1 | 18063 | 18458 |
| APD24439.1 | KY065502_p22 | hypothetical protein | phrog_4667 | unknown function | unknown function | 1 | 10940 | 11068 |
| APD24441.1 | KY065502_p24 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 11360 | 11773 |
| APD24464.1 | KY065502_p47 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 28105 | 29619 |
| APD24468.1 | KY065502_p51 | holin 1 | phrog_199 | holin | lysis | 1 | 36686 | 37015 |
| APD24444.1 | KY065502_p27 | ParB-like protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 12464 | 13558 |
| APD24437.1 | KY065502_p20 | holliday junction resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10333 | 10683 |
| APD24432.1 | KY065502_p15 | C-5 cytosine-specific DNA methylase | phrog_2882 | DNA methyltransferase | other | 1 | 7819 | 8625 |
| APD24455.1 | KY065502_p38 | hypothetical protein | phrog_2910 | unknown function | unknown function | 1 | 21452 | 21685 |
| APD24428.1 | KY065502_p11 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 5794 | 6786 |
| APD24423.1 | KY065502_p6 | replication protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3222 | 3488 |
| APD24434.1 | KY065502_p17 | hypothetical protein | phrog_997 | replication terminator | DNA, RNA and nucleotide metabolism | 1 | 8869 | 9303 |
| APD24435.1 | KY065502_p18 | hypothetical protein | phrog_1029 | unknown function | unknown function | 1 | 9305 | 10042 |