Genomic map of Pectobacterium phage PP74 (KY084243)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY084243
Definition
Pectobacterium phage PP74, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Berlinvirus; Pectobacterium virus PP74.
DB of origin
NUCCORE
Length
39790
Host Name
Pectobacterium wasabiae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
48.63
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD19618.1 KY084243_p1 ocr protein phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 958 1305
APD19636.1 KY084243_p24 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13380 15494
APD19659.1 KY084243_p46 DNA packaging protein A phrog_1351 terminase small subunit head and packaging 1 36078 36347
APD19663.1 KY084243_p4 hypothetical protein phrog_2385 unknown function unknown function 1 1585 1785
APD19638.1 KY084243_p26 hypothetical protein phrog_1334 unknown function unknown function 1 15801 16010
APD19664.1 KY084243_p21 hypothetical protein phrog_1950 unknown function unknown function 1 12331 12543
APD19655.1 KY084243_p43 tail fiber protein phrog_13980 tail fiber protein tail 1 33805 34743
APD19662.1 KY084243_p2 hypothetical protein phrog_7202 unknown function unknown function 1 1302 1466
APD19624.1 KY084243_p11 hypothetical protein phrog_10145 unknown function unknown function 1 7114 7194
APD19649.1 KY084243_p37 tubular protein B phrog_457 tail protein tail 1 23041 25416
APD19658.1 KY084243_p47 Rz-like lysis protein phrog_1327 Rz-like spanin lysis 1 36488 36922
APD19661.1 KY084243_p49 HNH homing endonuclease phrog_6254 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38713 39162
APD19634.1 KY084243_p22 hypothetical protein phrog_2254 unknown function unknown function 1 12558 12869
APD19629.1 KY084243_p16 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8349 9047
APD19642.1 KY084243_p30 hypothetical protein phrog_1391 unknown function unknown function 1 17572 17850
APD19628.1 KY084243_p15 RNA polymerase inhibitor phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8088 8279
APD19627.1 KY084243_p14 hypothetical protein phrog_1312 unknown function unknown function 1 7956 8075
APD19635.1 KY084243_p23 hypothetical protein phrog_4023 unknown function unknown function 1 12951 13367
APD19637.1 KY084243_p25 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 15514 15801
APD19621.1 KY084243_p6 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2059 4710
APD19650.1 KY084243_p38 internal virion protein A phrog_308 internal virion protein head and packaging 1 25494 25913
APD19660.1 KY084243_p48 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 36932 38689
APD19648.1 KY084243_p36 tubular protein A phrog_446 tail protein tail 1 22397 23005
APD19632.1 KY084243_p19 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 9924 10379
APD19644.1 KY084243_p32 head to tail connecting protein phrog_449 head-tail adaptor connector 1 18203 19804
APD19666.1 KY084243_p8 hypothetical protein phrog_2490 unknown function unknown function 1 5453 5602
APD19654.1 KY084243_p42 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 29224 33732
APD19640.1 KY084243_p28 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16225 17139
APD19619.1 KY084243_p3 hypothetical protein singleton unknown function unknown function 1 1463 1591
APD19665.1 KY084243_p7 hypothetical protein phrog_8103 unknown function unknown function 1 4798 5370
APD19633.1 KY084243_p20 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 10547 12256
APD19622.1 KY084243_p9 deoxyguanosine triphosphohydrolase inhibitor phrog_2949 dGTPase inhibitor; target for F exclusion other 1 5602 5862
APD19625.1 KY084243_p12 hypothetical protein phrog_1777 unknown function unknown function 1 7221 7484
APD19646.1 KY084243_p34 major capsid protein phrog_267 major head protein head and packaging 1 21021 22061
APD19657.1 KY084243_p45 holin phrog_920 holin lysis 1 35879 36076
APD19643.1 KY084243_p31 tail protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17865 18188
APD19656.1 KY084243_p44 tail fiber protein singleton unknown function unknown function 1 34718 35866
APD19626.1 KY084243_p13 hypothetical protein phrog_2585 nucleotide kinase other 1 7484 7963
APD19647.1 KY084243_p35 capsid assembly protein phrog_7473 unknown function unknown function 1 22079 22333
APD19651.1 KY084243_p39 hypothetical protein phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 25984 26298
AUO79640.1 KY084243_p50 hypothetical protein phrog_2193 unknown function unknown function 1 39408 39563
APD19620.1 KY084243_p5 hypothetical protein singleton unknown function unknown function 1 1769 1984
APD19623.1 KY084243_p10 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 5970 6998
APD19631.1 KY084243_p18 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9481 9927
APD19630.1 KY084243_p17 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9048 9500
APD19639.1 KY084243_p27 hypothetical protein phrog_6163 unknown function unknown function 1 16007 16228
APD19645.1 KY084243_p33 capsid assembly protein phrog_1052 head assembly head and packaging 1 19911 20822
APD19652.1 KY084243_p40 internal virion protein B phrog_805 internal virion protein head and packaging 1 26301 26906
APD19653.1 KY084243_p41 internal virion protein C phrog_1339 internal virion protein head and packaging 1 26921 29200
APD19641.1 KY084243_p29 hypothetical protein phrog_1447 unknown function unknown function 1 17309 17554