| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY087992 |
Definition |
Mycobacterium phage Mitti, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
57895 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
67.97 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD19190.1 | KY087992_p62 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 40929 | 41093 |
| APD19178.1 | KY087992_p48 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36502 | 36687 |
| APD19158.1 | KY087992_p25 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 20334 | 20852 |
| APD19166.1 | KY087992_p33 | holin | phrog_565 | holin | lysis | 1 | 28384 | 28782 |
| APD19225.1 | KY087992_p9 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 2478 | 3923 |
| APD19220.1 | KY087992_p94 | O-methyltransferase | phrog_2675 | DNA methyltransferase | other | 1 | 57288 | 57863 |
| APD19192.1 | KY087992_p64 | hypothetical protein | phrog_10545 | unknown function | unknown function | 1 | 41953 | 42096 |
| APD19226.1 | KY087992_p60 | hypothetical protein | phrog_13940 | unknown function | unknown function | 1 | 40253 | 40336 |
| APD19197.1 | KY087992_p69 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43525 | 43788 |
| APD19194.1 | KY087992_p66 | hypothetical protein | phrog_12856 | unknown function | unknown function | 1 | 42308 | 42589 |
| APD19182.1 | KY087992_p52 | hypothetical protein | phrog_12473 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37483 | 37794 |
| APD19167.1 | KY087992_p34 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 28779 | 29114 |
| APD19171.1 | KY087992_p38 | helix-turn-helix DNA binding domain protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30982 | 31308 |
| APD19160.1 | KY087992_p27 | hypothetical protein | phrog_1736 | minor tail protein | tail | 1 | 21958 | 22203 |
| APD19184.1 | KY087992_p55 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 38383 | 39075 |
| APD19140.1 | KY087992_p4 | hypothetical protein | phrog_5972 | unknown function | unknown function | 1 | 658 | 927 |
| APD19230.1 | KY087992_p15 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 10157 | 10531 |
| APD19195.1 | KY087992_p67 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42586 | 42702 |
| APD19198.1 | KY087992_p70 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 43785 | 44630 |
| APD19211.1 | KY087992_p85 | hypothetical protein | phrog_7647 | unknown function | unknown function | 1 | 53137 | 53370 |
| APD19162.1 | KY087992_p29 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 24509 | 25513 |
| APD19228.1 | KY087992_p46 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35767 | 36126 |
| APD19137.1 | KY087992_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 117 | 254 |
| APD19186.1 | KY087992_p57 | hypothetical protein | phrog_14062 | unknown function | unknown function | 1 | 39458 | 39667 |
| APD19222.1 | KY087992_p45 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 34865 | 35683 |
| APD19172.1 | KY087992_p39 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 31340 | 31639 |
| APD19142.1 | KY087992_p6 | hypothetical protein | phrog_7999 | unknown function | unknown function | 1 | 1286 | 1972 |
| APD19201.1 | KY087992_p73 | DNA primase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 45262 | 47883 |
| APD19177.1 | KY087992_p44 | integrase | phrog_1 | integrase | integration and excision | 1 | 33619 | 34884 |
| APD19229.1 | KY087992_p47 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36257 | 36505 |
| APD19196.1 | KY087992_p68 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 42773 | 43417 |
| APD19159.1 | KY087992_p26 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 20849 | 21946 |
| APD19183.1 | KY087992_p54 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 38140 | 38379 |
| APD19141.1 | KY087992_p5 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 924 | 1286 |
| APD19188.1 | KY087992_p59 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39978 | 40253 |
| APD19153.1 | KY087992_p19 | major tail protein | phrog_117 | major tail protein | tail | 1 | 11640 | 12251 |
| APD19146.1 | KY087992_p11 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 5502 | 8171 |
| APD19200.1 | KY087992_p72 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44790 | 45170 |
| APD19213.1 | KY087992_p87 | hypothetical protein | phrog_12916 | unknown function | unknown function | 1 | 53722 | 53877 |
| APD19193.1 | KY087992_p65 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42093 | 42311 |
| APD19185.1 | KY087992_p56 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 39072 | 39461 |
| APD19189.1 | KY087992_p61 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40333 | 40929 |
| APD19203.1 | KY087992_p77 | helix-turn-helix DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 49771 | 50649 |
| APD19180.1 | KY087992_p50 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36996 | 37178 |
| APD19206.1 | KY087992_p80 | protease | phrog_1006 | unknown function | unknown function | 1 | 51367 | 51951 |
| APD19205.1 | KY087992_p79 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 50849 | 51331 |
| APD19150.1 | KY087992_p16 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 10534 | 10890 |
| APD19219.1 | KY087992_p93 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56983 | 57288 |
| APD19143.1 | KY087992_p7 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1998 | 2237 |
| APD19202.1 | KY087992_p76 | hypothetical protein | phrog_12358 | unknown function | unknown function | 1 | 48997 | 49746 |
| APD19139.1 | KY087992_p3 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 478 | 645 |
| APD19154.1 | KY087992_p21 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 12354 | 12803 |
| APD19147.1 | KY087992_p12 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 8168 | 8365 |
| APD19138.1 | KY087992_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 251 | 481 |
| APD19212.1 | KY087992_p86 | hypothetical protein | phrog_3963 | unknown function | unknown function | 1 | 53399 | 53707 |
| APD19174.1 | KY087992_p41 | hypothetical protein | phrog_3851 | unknown function | unknown function | 1 | 31943 | 32332 |
| APD19163.1 | KY087992_p30 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 25536 | 25913 |
| APD19215.1 | KY087992_p89 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 54306 | 55028 |
| APD19207.1 | KY087992_p81 | hypothetical protein | phrog_14347 | unknown function | unknown function | 1 | 52061 | 52171 |
| APD19191.1 | KY087992_p63 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41090 | 41953 |
| APD19168.1 | KY087992_p35 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 29111 | 29371 |
| APD19216.1 | KY087992_p90 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 55093 | 55800 |
| APD19151.1 | KY087992_p17 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 10877 | 11137 |
| APD19156.1 | KY087992_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17413 | 18546 |
| APD19169.1 | KY087992_p36 | phosphoesterase | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29358 | 30548 |
| APD19148.1 | KY087992_p13 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 8457 | 9029 |
| APD19209.1 | KY087992_p83 | hypothetical protein | phrog_16540 | unknown function | unknown function | 1 | 52488 | 52865 |
| APD19221.1 | KY087992_p20 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 12354 | 13234 |
| APD19144.1 | KY087992_p8 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 2234 | 2506 |
| APD19208.1 | KY087992_p82 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 52201 | 52470 |
| APD19199.1 | KY087992_p71 | hypothetical protein | phrog_12554 | unknown function | unknown function | 1 | 44630 | 44800 |
| APD19157.1 | KY087992_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 18546 | 20333 |
| APD19227.1 | KY087992_p53 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37787 | 38140 |
| APD19175.1 | KY087992_p42 | hypothetical protein | phrog_8324 | unknown function | unknown function | 1 | 32329 | 32760 |
| APD19145.1 | KY087992_p10 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 3935 | 5521 |
| APD19173.1 | KY087992_p40 | hypothetical protein | phrog_7217 | unknown function | unknown function | 1 | 31636 | 31950 |
| APD19210.1 | KY087992_p84 | hypothetical protein | phrog_7536 | unknown function | unknown function | 1 | 52862 | 53035 |
| APD19152.1 | KY087992_p18 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 11134 | 11559 |
| APD19181.1 | KY087992_p51 | hypothetical protein | phrog_11977 | unknown function | unknown function | 1 | 37175 | 37486 |
| APD19187.1 | KY087992_p58 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 39664 | 39885 |
| APD19149.1 | KY087992_p14 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 9088 | 10017 |
| APD19155.1 | KY087992_p22 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 13237 | 17412 |
| APD19223.1 | KY087992_p74 | hypothetical protein | phrog_10480 | unknown function | unknown function | 1 | 48138 | 48512 |
| APD19179.1 | KY087992_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36824 | 36952 |
| APD19165.1 | KY087992_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 27554 | 28345 |
| APD19218.1 | KY087992_p92 | hypothetical protein | phrog_14339 | unknown function | unknown function | 1 | 56767 | 56979 |
| APD19176.1 | KY087992_p43 | hypothetical protein | phrog_806 | unknown function | unknown function | -1 | 32859 | 33380 |
| APD19214.1 | KY087992_p88 | hypothetical protein | phrog_11871 | unknown function | unknown function | 1 | 53874 | 54227 |
| APD19170.1 | KY087992_p37 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 30551 | 30832 |
| APD19224.1 | KY087992_p75 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 48500 | 49000 |
| APD19204.1 | KY087992_p78 | hypothetical protein | phrog_12502 | unknown function | unknown function | 1 | 50649 | 50852 |
| APD19217.1 | KY087992_p91 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 55889 | 56596 |
| APD19161.1 | KY087992_p28 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 22196 | 24505 |
| APD19164.1 | KY087992_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 25944 | 27554 |