| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY092480 |
Definition |
Streptomyces phage Picard, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Picardvirus; Streptomyces virus Picard. |
DB of origin |
NUCCORE |
Length |
39522 |
Host Name |
Streptomyces venezuelae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
72.6 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD18549.1 | KY092480_p18 | hypothetical protein | phrog_3398 | virion structural protein | head and packaging | 1 | 13242 | 14324 |
| APD18544.1 | KY092480_p13 | major tail protein | phrog_3884 | major tail protein | tail | 1 | 8930 | 9394 |
| APD18553.1 | KY092480_p23 | hypothetical protein | phrog_5225 | unknown function | unknown function | 1 | 17395 | 17661 |
| APD18579.1 | KY092480_p50 | hypothetical protein | phrog_13085 | unknown function | unknown function | 1 | 33258 | 34034 |
| APD18558.1 | KY092480_p28 | tRNA synthetase | phrog_35625 | tRNA synthetase | DNA, RNA and nucleotide metabolism | 1 | 20192 | 21307 |
| APD18578.1 | KY092480_p49 | hypothetical protein | phrog_29184 | unknown function | unknown function | 1 | 32839 | 33261 |
| APD18539.1 | KY092480_p7 | major capsid protein | phrog_212 | major head protein | head and packaging | 1 | 6248 | 7258 |
| APD18538.1 | KY092480_p6 | hypothetical protein | phrog_8952 | unknown function | unknown function | 1 | 5599 | 6231 |
| APD18584.1 | KY092480_p55 | hypothetical protein | phrog_16946 | unknown function | unknown function | 1 | 38307 | 38744 |
| APD18546.1 | KY092480_p14 | tail assembly chaperone | phrog_6959 | tail assembly chaperone | tail | 1 | 9391 | 10055 |
| APD18582.1 | KY092480_p53 | hypothetical protein | phrog_14382 | unknown function | unknown function | 1 | 35305 | 37236 |
| APD18573.1 | KY092480_p43 | hypothetical protein | phrog_17447 | unknown function | unknown function | 1 | 30095 | 30658 |
| APD18534.1 | KY092480_p2 | hypothetical protein | phrog_27842 | unknown function | unknown function | 1 | 1266 | 1490 |
| APD18569.1 | KY092480_p39 | hypothetical protein | phrog_26351 | unknown function | unknown function | 1 | 27864 | 28100 |
| APD18577.1 | KY092480_p47 | hypothetical protein | phrog_18645 | unknown function | unknown function | 1 | 32040 | 32714 |
| APD18587.1 | KY092480_p20 | hypothetical protein | phrog_9849 | unknown function | unknown function | 1 | 15463 | 16185 |
| APD18556.1 | KY092480_p26 | transcriptional regulator | phrog_12354 | transcriptional regulator | transcription regulation | 1 | 19142 | 19588 |
| APD18568.1 | KY092480_p38 | hypothetical protein | phrog_11955 | unknown function | unknown function | 1 | 27238 | 27867 |
| APD18580.1 | KY092480_p51 | hypothetical protein | phrog_25474 | unknown function | unknown function | 1 | 34031 | 34267 |
| APD18557.1 | KY092480_p27 | hypothetical protein | phrog_12213 | unknown function | unknown function | 1 | 19576 | 20058 |
| APD18536.1 | KY092480_p4 | head assembly protein | phrog_12049 | head morphogenesis | head and packaging | 1 | 2987 | 5329 |
| APD18588.1 | KY092480_p48 | hypothetical protein | phrog_25170 | unknown function | unknown function | 1 | 32711 | 32842 |
| APD18566.1 | KY092480_p36 | hypothetical protein | phrog_11881 | unknown function | unknown function | 1 | 25569 | 26102 |
| APD18585.1 | KY092480_p56 | helix-turn-helix DNA binding domain protein | phrog_5536 | unknown function | unknown function | 1 | 38985 | 39518 |
| APD18567.1 | KY092480_p37 | hypothetical protein | phrog_26464 | DNA repair protein | DNA, RNA and nucleotide metabolism | 1 | 26099 | 27241 |
| APD18543.1 | KY092480_p12 | hypothetical protein | phrog_2595 | head-tail connector protein | connector | 1 | 8489 | 8917 |
| APD18570.1 | KY092480_p40 | hypothetical protein | phrog_25823 | unknown function | unknown function | 1 | 28168 | 28452 |
| APD18560.1 | KY092480_p30 | integrase | phrog_95 | integrase | integration and excision | -1 | 21923 | 23566 |
| APD18571.1 | KY092480_p41 | DNA binding protein | phrog_6643 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 28449 | 29354 |
| APD18586.1 | KY092480_p8 | hypothetical protein | phrog_15682 | unknown function | unknown function | 1 | 7258 | 7443 |
| APD18550.1 | KY092480_p19 | minor tail protein | phrog_1885 | minor tail protein | tail | 1 | 14321 | 15451 |
| APD18540.1 | KY092480_p9 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 7446 | 7835 |
| APD18545.1 | KY092480_p15 | tail assembly chaperone | phrog_6959 | tail assembly chaperone | tail | 1 | 9391 | 9855 |
| APD18552.1 | KY092480_p22 | hypothetical protein | phrog_4316 | unknown function | unknown function | 1 | 17138 | 17398 |
| APD18537.1 | KY092480_p5 | hypothetical protein | phrog_13106 | unknown function | unknown function | 1 | 5334 | 5522 |
| APD18572.1 | KY092480_p42 | hypothetical protein | phrog_8924 | unknown function | unknown function | 1 | 29361 | 30098 |
| APD18576.1 | KY092480_p46 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31479 | 31958 |
| APD18564.1 | KY092480_p34 | hypothetical protein | phrog_13097 | unknown function | unknown function | 1 | 24920 | 25123 |
| APD18551.1 | KY092480_p21 | endolysin | phrog_1493 | endolysin | lysis | 1 | 16297 | 17079 |
| APD18554.1 | KY092480_p24 | hypothetical protein | phrog_10815 | unknown function | unknown function | -1 | 17813 | 18034 |
| APD18561.1 | KY092480_p31 | hypothetical protein | phrog_12722 | unknown function | unknown function | -1 | 23563 | 23955 |
| APD18547.1 | KY092480_p16 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 10113 | 12329 |
| APD18542.1 | KY092480_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 8143 | 8496 |
| APD18581.1 | KY092480_p52 | hypothetical protein | phrog_7575 | unknown function | unknown function | 1 | 34264 | 35094 |
| APD18563.1 | KY092480_p33 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 24705 | 24923 |
| APD18565.1 | KY092480_p35 | hypothetical protein | phrog_11833 | unknown function | unknown function | 1 | 25186 | 25572 |
| APD18535.1 | KY092480_p3 | portal protein | phrog_533 | portal protein | head and packaging | 1 | 1487 | 2965 |
| APD18562.1 | KY092480_p32 | hypothetical protein | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 23981 | 24445 |
| APD18583.1 | KY092480_p54 | hypothetical protein | phrog_21202 | unknown function | unknown function | 1 | 37305 | 38222 |
| APD18555.1 | KY092480_p25 | DNA binding protein | phrog_9908 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 18031 | 19005 |
| APD18559.1 | KY092480_p29 | RNA binding protein | phrog_19935 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 21304 | 21663 |
| APD18541.1 | KY092480_p10 | head-to-tail connector protein | phrog_3881 | head-tail connector protein | connector | 1 | 7832 | 8146 |
| APD18574.1 | KY092480_p44 | hypothetical protein | phrog_12895 | unknown function | unknown function | 1 | 30655 | 30828 |
| APD18533.1 | KY092480_p1 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1 | 1257 |
| APD18575.1 | KY092480_p45 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30958 | 31479 |
| APD18548.1 | KY092480_p17 | minor tail protein | phrog_5577 | minor tail protein | tail | 1 | 12333 | 13226 |