| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY092483 |
Definition |
Streptomyces phage Bioscum, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Austintatiousvirus; unclassified Austintatiousvirus. |
DB of origin |
NUCCORE |
Length |
37830 |
Host Name |
Streptomyces venezuelae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
72.34 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD18733.1 | KY092483_p38 | hypothetical protein | phrog_11955 | unknown function | unknown function | 1 | 26417 | 27151 |
| APD18719.1 | KY092483_p22 | hypothetical protein | phrog_4316 | unknown function | unknown function | 1 | 17134 | 17367 |
| APD18709.1 | KY092483_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7869 | 8219 |
| APD18714.1 | KY092483_p17 | minor tail protein | phrog_5577 | minor tail protein | tail | 1 | 12236 | 13132 |
| APD18702.1 | KY092483_p4 | head assembly protein | phrog_12049 | head morphogenesis | head and packaging | 1 | 3009 | 4988 |
| APD18740.1 | KY092483_p46 | hypothetical protein | phrog_29010 | unknown function | unknown function | 1 | 30918 | 31628 |
| APD18721.1 | KY092483_p26 | hypothetical protein | phrog_26460 | unknown function | unknown function | -1 | 19567 | 19782 |
| APD18717.1 | KY092483_p20 | hypothetical protein | phrog_9849 | unknown function | unknown function | 1 | 15367 | 16089 |
| APD18710.1 | KY092483_p12 | hypothetical protein | phrog_2595 | head-tail connector protein | connector | 1 | 8212 | 8625 |
| APD18725.1 | KY092483_p30 | integrase | phrog_95 | integrase | integration and excision | -1 | 21264 | 23000 |
| APD18749.1 | KY092483_p44 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29978 | 30484 |
| APD18743.1 | KY092483_p51 | hypothetical protein | phrog_26002 | unknown function | unknown function | 1 | 36034 | 36348 |
| APD18720.1 | KY092483_p23 | hypothetical protein | phrog_5225 | unknown function | unknown function | 1 | 17364 | 17627 |
| APD18724.1 | KY092483_p29 | hypothetical protein | phrog_10815 | unknown function | unknown function | 1 | 20964 | 21146 |
| APD18711.1 | KY092483_p13 | major tail protein | phrog_3884 | major tail protein | tail | 1 | 8638 | 9108 |
| APD18726.1 | KY092483_p31 | hypothetical protein | phrog_12722 | unknown function | unknown function | -1 | 22997 | 23368 |
| APD18731.1 | KY092483_p36 | hypothetical protein | phrog_11881 | unknown function | unknown function | 1 | 24985 | 25362 |
| APD18705.1 | KY092483_p7 | major capsid protein | phrog_544 | major head protein | head and packaging | 1 | 6045 | 6902 |
| APD18728.1 | KY092483_p33 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 24145 | 24357 |
| APD18699.1 | KY092483_p1 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1 | 1272 |
| APD18707.1 | KY092483_p9 | hypothetical protein | phrog_541 | head-tail adaptor | connector | 1 | 7157 | 7555 |
| APD18739.1 | KY092483_p45 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30484 | 30945 |
| APD18722.1 | KY092483_p27 | hypothetical protein | phrog_25258 | unknown function | unknown function | -1 | 19803 | 20051 |
| APD18730.1 | KY092483_p35 | hypothetical protein | phrog_11833 | unknown function | unknown function | 1 | 24602 | 24988 |
| APD18735.1 | KY092483_p40 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 27555 | 27854 |
| APD18713.1 | KY092483_p16 | tape measure protein | phrog_28 | tail length tape measure protein | tail | 1 | 9816 | 12233 |
| APD18703.1 | KY092483_p5 | hypothetical protein | phrog_13106 | unknown function | unknown function | 1 | 4992 | 5156 |
| APD18738.1 | KY092483_p43 | hypothetical protein | phrog_12895 | unknown function | unknown function | 1 | 29698 | 29886 |
| APD18723.1 | KY092483_p28 | transcriptional regulator | phrog_9908 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 20162 | 20971 |
| APD18741.1 | KY092483_p48 | hypothetical protein | phrog_7575 | unknown function | unknown function | 1 | 32463 | 33296 |
| APD18704.1 | KY092483_p6 | hypothetical protein | phrog_22063 | unknown function | unknown function | 1 | 5214 | 6005 |
| APD18736.1 | KY092483_p41 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 28146 | 29024 |
| APD18712.1 | KY092483_p15 | tail assembly chaperone | phrog_6959 | tail assembly chaperone | tail | 1 | 9105 | 9557 |
| APD18700.1 | KY092483_p2 | hypothetical protein | phrog_23001 | unknown function | unknown function | 1 | 1284 | 1508 |
| APD18751.1 | KY092483_p14 | tail assembly chaperone | phrog_6959 | tail assembly chaperone | tail | 1 | 9105 | 9763 |
| APD18706.1 | KY092483_p8 | hypothetical protein | phrog_23232 | unknown function | unknown function | 1 | 6922 | 7152 |
| APD18729.1 | KY092483_p34 | hypothetical protein | phrog_13097 | unknown function | unknown function | 1 | 24354 | 24539 |
| APD18737.1 | KY092483_p42 | hypothetical protein | phrog_8924 | unknown function | unknown function | 1 | 29021 | 29701 |
| APD18708.1 | KY092483_p10 | head-to-tail connector protein | phrog_3881 | head-tail connector protein | connector | 1 | 7552 | 7872 |
| APD18715.1 | KY092483_p18 | hypothetical protein | phrog_3398 | virion structural protein | head and packaging | 1 | 13146 | 14228 |
| APD18750.1 | KY092483_p47 | hypothetical protein | phrog_13085 | unknown function | unknown function | 1 | 31639 | 32466 |
| APD18718.1 | KY092483_p21 | endolysin | phrog_880 | endolysin | lysis | 1 | 16159 | 17100 |
| APD18727.1 | KY092483_p32 | hypothetical protein | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 23391 | 23831 |
| APD18752.1 | KY092483_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19079 | 19222 |
| APD18748.1 | KY092483_p50 | hypothetical protein | phrog_24242 | unknown function | unknown function | 1 | 34335 | 35957 |
| APD18744.1 | KY092483_p52 | hypothetical protein | phrog_23596 | unknown function | unknown function | 1 | 36345 | 36599 |
| APD18742.1 | KY092483_p49 | hypothetical protein | phrog_14382 | unknown function | unknown function | 1 | 33454 | 34275 |
| APD18746.1 | KY092483_p54 | helix-turn-helix DNA binding domain protein | phrog_5536 | unknown function | unknown function | 1 | 37299 | 37811 |
| APD18734.1 | KY092483_p39 | hypothetical protein | phrog_23146 | unknown function | unknown function | 1 | 27148 | 27489 |
| APD18745.1 | KY092483_p53 | hypothetical protein | phrog_12816 | unknown function | unknown function | 1 | 36823 | 37221 |
| APD18747.1 | KY092483_p24 | O-methyltransferase | phrog_13505 | methyltransferase | other | -1 | 17886 | 19070 |
| APD18732.1 | KY092483_p37 | hypothetical protein | phrog_21649 | unknown function | unknown function | 1 | 25359 | 26420 |
| APD18701.1 | KY092483_p3 | portal protein | phrog_533 | portal protein | head and packaging | 1 | 1495 | 2991 |
| APD18716.1 | KY092483_p19 | minor tail protein | phrog_1885 | minor tail protein | tail | 1 | 14225 | 15355 |