Genomic map of Salmonella phage SP01 (KY114934)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY114934
Definition
Salmonella phage SP01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus; Salmonella virus SP01.
DB of origin
NUCCORE
Length
117842
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
156
%GC
38.98
Number of singletons
3
Number of paralogs
19

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI99392.1 KY114934_p35 tail length tape-measure protein phrog_31 central tail fiber J tail 1 28858 31707
ATI99384.1 KY114934_p27 hypothetical protein phrog_3725 tail completion or Neck1 protein connector 1 19964 20731
ATI99474.1 KY114934_p117 hypothetical protein phrog_5265 unknown function unknown function 1 92873 93157
ATI99431.1 KY114934_p74 ribonucleotide reductase of class Ia (aerobic), alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 67918 70251
ATI99487.1 KY114934_p130 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other 1 99915 100766
ATI99505.1 KY114934_p3 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover -1 2029 2241
ATI99481.1 KY114934_p124 endolysin phrog_465 endolysin lysis 1 97345 97758
ATI99480.1 KY114934_p123 holin phrog_860 holin lysis 1 96692 97348
ATI99475.1 KY114934_p118 hypothetical protein phrog_5468 unknown function unknown function 1 93268 93612
ATI99396.1 KY114934_p39 hypothetical protein phrog_5592 unknown function unknown function -1 37515 37763
ATI99501.1 KY114934_p144 hypothetical protein phrog_8993 unknown function unknown function 1 106769 107494
ATI99389.1 KY114934_p32 hypothetical protein phrog_3914 tail assembly chaperone tail 1 24041 24373
ATI99455.1 KY114934_p98 hypothetical protein phrog_5153 unknown function unknown function 1 83238 83444
ATI99429.1 KY114934_p72 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other 1 66800 67552
ATI99449.1 KY114934_p92 recombination related exonuclease phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism 1 79776 80219
ATI99418.1 KY114934_p61 DNA primase C phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism -1 57189 59972
ATI99367.1 KY114934_p10 hypothetical protein phrog_1745 DNA transfer protein other 1 5881 7551
ATI99473.1 KY114934_p116 hypothetical protein phrog_5792 unknown function unknown function 1 92580 92876
ATI99401.1 KY114934_p44 recombinase phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 41363 42340
ATI99498.1 KY114934_p141 hypothetical protein phrog_6933 unknown function unknown function 1 105319 105522
ATI99484.1 KY114934_p127 hypothetical protein singleton unknown function unknown function 1 99118 99282
ATI99482.1 KY114934_p125 hypothetical protein phrog_4328 unknown function unknown function 1 98330 98758
ATI99461.1 KY114934_p104 hypothetical protein phrog_6221 unknown function unknown function 1 86641 86808
ATI99398.1 KY114934_p41 ribonuclease H phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 38184 39059
ATI99464.1 KY114934_p107 hypothetical protein phrog_27262 unknown function unknown function 1 88580 88816
ATI99408.1 KY114934_p51 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 49534 50742
ATI99458.1 KY114934_p101 hypothetical protein phrog_7042 unknown function unknown function 1 84614 84901
ATI99507.1 KY114934_p5 hypothetical protein phrog_5145 unknown function unknown function -1 2477 2707
ATI99366.1 KY114934_p154 A2 protein phrog_37774 unknown function unknown function 1 114277 114429
ATI99394.1 KY114934_p37 hypothetical protein phrog_1084 unknown function unknown function 1 33798 34220
ATI99393.1 KY114934_p36 tail fibers protein phrog_3890 straight fibre tail protein tail 1 31708 33792
ATI99358.1 KY114934_p1 hypothetical protein phrog_6973 unknown function unknown function -1 1092 1232
ATI99503.1 KY114934_p146 hypothetical protein phrog_6973 unknown function unknown function -1 109986 110126
ATI99434.1 KY114934_p77 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 71998 72531
ATI99435.1 KY114934_p78 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 72531 73364
ATI99500.1 KY114934_p143 hypothetical protein phrog_5271 unknown function unknown function 1 106149 106769
ATI99368.1 KY114934_p11 hypothetical protein phrog_415 polynucleotide kinase other 1 8092 8826
ATI99406.1 KY114934_p49 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 48117 49007
ATI99451.1 KY114934_p94 hypothetical protein phrog_200 lipoprotein other 1 81016 81963
ATI99495.1 KY114934_p138 hypothetical protein phrog_4731 unknown function unknown function 1 103957 104187
ATI99371.1 KY114934_p14 hypothetical protein phrog_6369 unknown function unknown function -1 10006 10161
ATI99510.1 KY114934_p8 hypothetical protein phrog_3747 unknown function unknown function 1 4776 5027
ATI99471.1 KY114934_p114 hypothetical protein phrog_4821 unknown function unknown function 1 91915 92214
ATI99443.1 KY114934_p86 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 76676 77377
ATI99388.1 KY114934_p31 hypothetical protein phrog_313 Tail assembly chaperone tail 1 23539 23943
ATI99445.1 KY114934_p88 tail fiber protein phrog_1491 tail fiber protein tail 1 77684 78322
ATI99512.1 KY114934_p155 A1 protein phrog_1745 DNA transfer protein other 1 114775 116445
ATI99415.1 KY114934_p58 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 55453 55863
ATI99402.1 KY114934_p45 hypothetical protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 42377 43150
ATI99463.1 KY114934_p106 hypothetical protein phrog_2210 unknown function unknown function 1 88390 88587
ATI99509.1 KY114934_p7 hypothetical protein phrog_4718 unknown function unknown function 1 4343 4546
ATI99462.1 KY114934_p105 hypothetical protein phrog_16298 unknown function unknown function 1 87744 87917
ATI99488.1 KY114934_p131 hypothetical protein phrog_6073 Rz-like spanin lysis 1 100766 100996
ATI99508.1 KY114934_p6 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 3308 3829
ATI99506.1 KY114934_p4 hypothetical protein phrog_5607 unknown function unknown function -1 2245 2427
ATI99454.1 KY114934_p97 hypothetical protein phrog_7716 unknown function unknown function 1 83078 83245
ATI99425.1 KY114934_p68 hypothetical protein phrog_5236 unknown function unknown function -1 63233 63436
ATI99404.1 KY114934_p47 hypothetical protein phrog_19628 unknown function unknown function -1 44997 45284
ATI99420.1 KY114934_p63 hypothetical protein phrog_2502 unknown function unknown function -1 60992 61420
ATI99381.1 KY114934_p24 capsid and scaffold protein phrog_80 head maturation protease head and packaging 1 17366 17998
ATI99492.1 KY114934_p135 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 102815 103351
ATI99423.1 KY114934_p66 SIR2 family NAD-dependent protein deacetylase phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism -1 62252 63070
ATI99359.1 KY114934_p147 hypothetical protein phrog_28858 unknown function unknown function -1 110454 110600
ATI99444.1 KY114934_p87 hypothetical protein phrog_5252 unknown function unknown function 1 77448 77630
ATI99386.1 KY114934_p29 tail fibers protein phrog_3575 major tail protein tail 1 21247 22638
ATI99468.1 KY114934_p111 pyruvate formate-lyase phrog_1209 unknown function unknown function 1 90358 90726
ATI99472.1 KY114934_p115 hypothetical protein phrog_5486 unknown function unknown function 1 92207 92626
ATI99438.1 KY114934_p81 ribonuclease H phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 74509 74985
ATI99363.1 KY114934_p151 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 112202 112723
ATI99466.1 KY114934_p109 hypothetical protein phrog_15108 unknown function unknown function 1 89545 89712
ATI99457.1 KY114934_p100 hypothetical protein phrog_5876 unknown function unknown function 1 84292 84564
ATI99456.1 KY114934_p99 hypothetical protein phrog_4551 unknown function unknown function 1 83535 83810
ATI99437.1 KY114934_p80 hypothetical protein phrog_5321 unknown function unknown function 1 74228 74509
ATI99419.1 KY114934_p62 hypothetical protein phrog_2502 unknown function unknown function -1 60593 60982
ATI99382.1 KY114934_p25 capsid and scaffold protein phrog_10 major head protein head and packaging 1 18016 19392
ATI99387.1 KY114934_p30 tail fibers protein phrog_3889 base plate tail tube protein tail 1 22643 23539
ATI99440.1 KY114934_p83 swarming motility protein YbiA phrog_1017 unknown function unknown function 1 75344 75793
ATI99417.1 KY114934_p60 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism -1 56193 56897
ATI99493.1 KY114934_p136 hypothetical protein phrog_4984 unknown function unknown function 1 103384 103629
ATI99413.1 KY114934_p56 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 54434 55099
ATI99379.1 KY114934_p22 portal (connector) protein phrog_12 portal protein head and packaging 1 15657 16874
ATI99497.1 KY114934_p140 capsid and scaffold protein phrog_4905 unknown function unknown function 1 104926 105264
ATI99411.1 KY114934_p54 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 52831 53802
ATI99491.1 KY114934_p134 hypothetical protein phrog_3880 unknown function unknown function 1 102543 102821
ATI99478.1 KY114934_p121 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 95171 95923
ATI99372.1 KY114934_p15 receptor blocking protein phrog_8596 unknown function unknown function -1 10161 10289
ATI99452.1 KY114934_p95 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 82059 82577
ATI99494.1 KY114934_p137 hypothetical protein phrog_4804 unknown function unknown function 1 103626 103871
ATI99469.1 KY114934_p112 hypothetical protein phrog_5021 unknown function unknown function 1 91217 91564
ATI99483.1 KY114934_p126 homing endonuclease singleton unknown function unknown function 1 98755 98925
ATI99467.1 KY114934_p110 hypothetical protein phrog_4760 unknown function unknown function 1 89780 90070
ATI99477.1 KY114934_p120 hypothetical protein phrog_739 Rz-like spanin lysis 1 94444 94887
ATI99439.1 KY114934_p82 hypothetical protein phrog_4593 unknown function unknown function 1 75063 75347
ATI99448.1 KY114934_p91 hypothetical protein phrog_5077 unknown function unknown function 1 79606 79776
ATI99373.1 KY114934_p16 receptor blocking protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover -1 10466 10732
ATI99365.1 KY114934_p153 hypothetical protein phrog_3747 unknown function unknown function 1 113670 113921
ATI99459.1 KY114934_p102 hypothetical protein phrog_5473 unknown function unknown function 1 85320 85505
ATI99470.1 KY114934_p113 hypothetical protein phrog_2855 unknown function unknown function 1 91641 91922
ATI99485.1 KY114934_p128 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 99279 99569
ATI99489.1 KY114934_p132 phosphoesterase phrog_547 phosphoesterase other 1 101277 101867
ATI99502.1 KY114934_p145 hypothetical protein phrog_4605 unknown function unknown function 1 107487 108215
ATI99405.1 KY114934_p48 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 45487 48054
ATI99399.1 KY114934_p42 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 39059 39541
ATI99424.1 KY114934_p67 hypothetical protein phrog_5827 unknown function unknown function -1 63070 63264
ATI99442.1 KY114934_p85 hypothetical protein phrog_4586 unknown function unknown function 1 76426 76647
ATI99496.1 KY114934_p139 hypothetical protein phrog_4215 unknown function unknown function 1 104484 104945
ATI99430.1 KY114934_p73 hypothetical protein phrog_5357 tail length tape measure protein tail 1 67554 67775
ATI99460.1 KY114934_p103 hypothetical protein phrog_19286 unknown function unknown function 1 85609 85767
ATI99400.1 KY114934_p43 recombination related exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 39544 41340
ATI99395.1 KY114934_p38 tail fiber protein phrog_6578 tail fiber protein tail 1 34220 37471
ATI99410.1 KY114934_p53 DNA ligase phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 51849 52628
ATI99362.1 KY114934_p150 hypothetical protein phrog_5145 unknown function unknown function -1 111371 111601
ATI99479.1 KY114934_p122 ATP-dependent Clp protease proteolytic subunit phrog_1827 ATP-dependent protease other 1 95936 96520
ATI99390.1 KY114934_p33 tail length tape-measure protein phrog_3779 tail length tape measure protein tail 1 24457 28137
ATI99374.1 KY114934_p17 receptor-binding protein phrog_4815 receptor binding tail protein tail 1 10818 12575
ATI99370.1 KY114934_p13 tail assembly protein phrog_5851 unknown function unknown function -1 9708 9902
ATI99375.1 KY114934_p18 hypothetical protein phrog_3802 terminase small subunit head and packaging 1 12586 13068
ATI99378.1 KY114934_p21 hypothetical protein phrog_3497 unknown function unknown function 1 15220 15657
ATI99432.1 KY114934_p75 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 70307 70789
ATI99422.1 KY114934_p65 hypothetical protein phrog_5116 unknown function unknown function -1 61916 62098
ATI99421.1 KY114934_p64 hypothetical protein phrog_18062 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism -1 61423 61701
ATI99416.1 KY114934_p59 hypothetical protein phrog_643 transcriptional regulator transcription regulation -1 55970 56200
ATI99407.1 KY114934_p50 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 49004 49537
ATI99453.1 KY114934_p96 hypothetical protein phrog_10617 unknown function unknown function 1 82790 82978
ATI99465.1 KY114934_p108 hypothetical protein phrog_5598 unknown function unknown function 1 89084 89305
ATI99377.1 KY114934_p20 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism 1 14556 15248
ATI99513.1 KY114934_p156 deoxynucleoside-5'-monophosphatase phrog_415 polynucleotide kinase other 1 116986 117720
ATI99369.1 KY114934_p12 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 9000 9554
ATI99391.1 KY114934_p34 hypothetical protein phrog_1302 distal tail protein tail 1 28247 28861
ATI99499.1 KY114934_p142 hypothetical protein phrog_4605 unknown function unknown function 1 105524 105964
ATI99364.1 KY114934_p152 hypothetical protein phrog_4718 unknown function unknown function 1 113237 113440
ATI99428.1 KY114934_p71 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 65640 66503
ATI99412.1 KY114934_p55 hypothetical protein phrog_4053 transcriptional regulator transcription regulation -1 54141 54452
ATI99383.1 KY114934_p26 hypothetical protein phrog_442 head-tail adaptor connector 1 19452 19964
ATI99490.1 KY114934_p133 hypothetical protein phrog_4979 unknown function unknown function 1 102035 102466
ATI99511.1 KY114934_p9 hypothetical protein phrog_37774 unknown function unknown function 1 5383 5535
ATI99447.1 KY114934_p90 hypothetical protein phrog_938 endolysin lysis 1 79088 79537
ATI99397.1 KY114934_p40 deoxyUTP pyrophosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 37741 38187
ATI99426.1 KY114934_p69 hypothetical protein phrog_7953 unknown function unknown function -1 63446 63727
ATI99385.1 KY114934_p28 hypothetical protein phrog_3907 tail terminator connector 1 20735 21220
ATI99409.1 KY114934_p52 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation -1 51089 51856
ATI99360.1 KY114934_p148 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover -1 110923 111135
ATI99486.1 KY114934_p129 hypothetical protein singleton unknown function unknown function 1 99772 99912
ATI99433.1 KY114934_p76 ribonucleotide reductase of class Ia (aerobic), beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 70856 72001
ATI99450.1 KY114934_p93 hypothetical protein phrog_19105 unknown function unknown function 1 80371 80508
ATI99361.1 KY114934_p149 hypothetical protein phrog_5607 unknown function unknown function -1 111139 111321
ATI99414.1 KY114934_p57 hypothetical protein phrog_3696 unknown function unknown function -1 55147 55437
ATI99441.1 KY114934_p84 hypothetical protein phrog_4516 unknown function unknown function 1 75869 76384
ATI99427.1 KY114934_p70 hypothetical protein phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 63827 65653
ATI99376.1 KY114934_p19 terminase large subunit phrog_2 terminase large subunit head and packaging 1 13068 14384
ATI99403.1 KY114934_p46 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 43648 45000
ATI99380.1 KY114934_p23 tail fibers protein phrog_2973 Hoc-like head decoration head and packaging 1 16871 17362
ATI99476.1 KY114934_p119 hypothetical protein phrog_4243 unknown function unknown function 1 93767 94447
ATI99436.1 KY114934_p79 homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 73361 74134
ATI99504.1 KY114934_p2 hypothetical protein phrog_28858 unknown function unknown function -1 1560 1706
ATI99446.1 KY114934_p89 hypothetical protein phrog_1479 unknown function unknown function 1 78765 79082