Genomic map of Pectobacterium phage PP81 (KY124276)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY124276
Definition
Pectobacterium phage PP81, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Pektosvirus; unclassified Pektosvirus; Pectobacterium virus PP81.
DB of origin
NUCCORE
Length
40727
Host Name
Pectobacterium carotovorum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
43
%GC
48.93
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APU03032.1 KY124276_p4 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 3535 6207
APU03045.1 KY124276_p18 hypothetical protein phrog_2254 unknown function unknown function 1 14208 14504
APU03067.1 KY124276_p42 Rz-like lysis protein phrog_1327 Rz-like spanin lysis 1 38272 38781
APU03052.1 KY124276_p25 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 18458 19399
APU03071.1 KY124276_p28 tail assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 20630 20905
APU03036.1 KY124276_p9 hypothetical protein phrog_36492 unknown function unknown function 1 8573 8815
APU03059.1 KY124276_p34 tubular protein B phrog_457 tail protein tail 1 25631 28012
APU03043.1 KY124276_p16 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 12101 13843
APU03049.1 KY124276_p22 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 17727 17996
APU03030.1 KY124276_p2 hypothetical protein phrog_25044 unknown function unknown function 1 1905 2222
APU03031.1 KY124276_p3 seryl-threonyl protein kinase phrog_2828 serine-threonine kinase other 1 2206 3366
APU03033.1 KY124276_p5 hypothetical protein phrog_9238 unknown function unknown function 1 6366 6764
APU03039.1 KY124276_p12 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 10188 10364
APU03063.1 KY124276_p38 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 31399 35415
APU03051.1 KY124276_p24 hypothetical protein phrog_2251 unknown function unknown function 1 18205 18471
APU03029.1 KY124276_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 1278 1721
APU03058.1 KY124276_p33 tubular protein A phrog_446 tail protein tail 1 25018 25608
APU03065.1 KY124276_p40 holin phrog_920 holin lysis 1 37741 37947
APU03050.1 KY124276_p23 hypothetical protein phrog_1334 unknown function unknown function 1 17999 18208
APU03069.1 KY124276_p7 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 7250 8353
APU03044.1 KY124276_p17 hypothetical protein phrog_1950 unknown function unknown function 1 13973 14185
APU03047.1 KY124276_p20 tRNA nucleotidyl transferase-related protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 14989 15519
APU03042.1 KY124276_p15 endolysin phrog_822 amidase lysis 1 11627 12076
APU03055.1 KY124276_p30 capsid scaffolidng protein phrog_1052 head assembly head and packaging 1 22601 23533
APU03068.1 KY124276_p43 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 38765 40504
APU03066.1 KY124276_p41 terminase small subunit phrog_1351 terminase small subunit head and packaging 1 37949 38218
APU03040.1 KY124276_p13 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 10465 11169
APU03070.1 KY124276_p27 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 19925 20350
APU03037.1 KY124276_p10 hypothetical protein singleton unknown function unknown function 1 8812 9015
APU03038.1 KY124276_p11 hypothetical protein phrog_4943 unknown function unknown function 1 9539 10198
APU03056.1 KY124276_p31 major capsid protein phrog_267 major head protein head and packaging 1 23607 24647
APU03054.1 KY124276_p29 head to tail connection protein phrog_449 head-tail adaptor connector 1 20918 22534
APU03062.1 KY124276_p37 internal virion protein C phrog_1339 internal virion protein head and packaging 1 29113 31374
APU03057.1 KY124276_p32 hypothetical protein phrog_7473 unknown function unknown function 1 24716 24946
APU03064.1 KY124276_p39 tail spike protein phrog_8460 tail fiber protein tail 1 35480 37741
APU03035.1 KY124276_p8 hypothetical protein singleton unknown function unknown function 1 8446 8583
APU03061.1 KY124276_p36 internal virion protein B phrog_805 internal virion protein head and packaging 1 28515 29096
APU03048.1 KY124276_p21 DNA-directed DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 15516 17699
APU03034.1 KY124276_p6 hypothetical protein phrog_2490 unknown function unknown function 1 6867 7040
APU03046.1 KY124276_p19 hypothetical protein phrog_4023 unknown function unknown function 1 14488 14970
APU03053.1 KY124276_p26 hypothetical protein phrog_1447 unknown function unknown function 1 19675 19920
APU03060.1 KY124276_p35 internal virion protein A phrog_308 internal virion protein head and packaging 1 28102 28512
APU03041.1 KY124276_p14 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 11169 11624