Genomic map of Mycobacterium phage Taptic (KY130461)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY130461
Definition
Mycobacterium phage Taptic, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
60973
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
67.43
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APD19255.1 KY130461_p25 minor tail protein phrog_416 minor tail protein tail 1 29324 30529
APD19253.1 KY130461_p23 minor tail protein phrog_837 minor tail protein tail 1 26126 27163
APD19298.1 KY130461_p69 hypothetical protein phrog_5429 DNA repair protein DNA, RNA and nucleotide metabolism 1 49940 50446
APD19322.1 KY130461_p88 hypothetical protein phrog_24634 unknown function unknown function 1 58811 59023
APD19268.1 KY130461_p38 helix-turn-helix DNA binding domain protein phrog_14639 cro-like repressor transcription regulation 1 38403 38675
APD19264.1 KY130461_p34 hypothetical protein phrog_915 unknown function unknown function 1 35259 35615
APD19321.1 KY130461_p76 hypothetical protein phrog_24634 unknown function unknown function 1 54819 55070
APD19319.1 KY130461_p68 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 49502 49873
APD19281.1 KY130461_p51 DNA recombinase phrog_1366 unknown function unknown function 1 42806 43846
APD19297.1 KY130461_p67 HNH endonuclease phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49153 49491
APD19247.1 KY130461_p17 hypothetical protein phrog_810 unknown function unknown function 1 17229 17750
APD19288.1 KY130461_p58 hypothetical protein phrog_20591 unknown function unknown function 1 46455 46958
APD19312.1 KY130461_p85 hypothetical protein phrog_20036 unknown function unknown function 1 57999 58310
APD19310.1 KY130461_p83 hypothetical protein phrog_19324 unknown function unknown function 1 56984 57526
APD19303.1 KY130461_p75 hypothetical protein phrog_5855 unknown function unknown function 1 54303 54803
APD19234.1 KY130461_p4 hypothetical protein phrog_21481 unknown function unknown function 1 2536 2850
APD19276.1 KY130461_p46 hypothetical protein phrog_21720 unknown function unknown function 1 40954 41139
APD19304.1 KY130461_p77 hypothetical protein phrog_2287 unknown function unknown function 1 55054 55272
APD19286.1 KY130461_p56 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 45202 45942
APD19254.1 KY130461_p24 minor tail protein phrog_3493 minor tail protein tail 1 27160 29289
APD19313.1 KY130461_p86 hypothetical protein phrog_10592 unknown function unknown function 1 58307 58558
APD19251.1 KY130461_p21 tapemeasure protein phrog_934 tail length tape measure protein tail 1 19168 24675
APD19277.1 KY130461_p47 hypothetical protein phrog_21184 unknown function unknown function 1 41136 41552
APD19273.1 KY130461_p43 hypothetical protein phrog_21317 unknown function unknown function 1 39868 40131
APD19246.1 KY130461_p16 hypothetical protein phrog_783 head-tail adaptor connector 1 16492 17229
APD19240.1 KY130461_p10 hypothetical protein phrog_779 unknown function unknown function 1 12673 13449
APD19262.1 KY130461_p32 hypothetical protein phrog_892 tail fiber protein tail 1 34112 34531
APD19278.1 KY130461_p48 hypothetical protein phrog_9420 unknown function unknown function 1 41540 41902
APD19269.1 KY130461_p39 hypothetical protein phrog_21783 unknown function unknown function 1 38672 39040
APD19305.1 KY130461_p78 hypothetical protein phrog_2355 unknown function unknown function 1 55327 55809
APD19248.1 KY130461_p18 hypothetical protein phrog_901 unknown function unknown function 1 17761 18147
APD19272.1 KY130461_p42 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 39536 39757
APD19232.1 KY130461_p2 terminase phrog_38 terminase large subunit head and packaging 1 348 1952
APD19283.1 KY130461_p53 hypothetical protein phrog_21460 unknown function unknown function 1 44174 44368
APD19291.1 KY130461_p61 hypothetical protein phrog_15432 unknown function unknown function 1 47404 47754
APD19300.1 KY130461_p72 hypothetical protein phrog_7858 unknown function unknown function 1 51258 52646
APD19267.1 KY130461_p37 holin phrog_526 holin lysis 1 37653 38162
APD19289.1 KY130461_p59 hypothetical protein phrog_1495 unknown function unknown function 1 46958 47194
APD19260.1 KY130461_p30 hypothetical protein phrog_282 unknown function unknown function 1 32174 32773
APD19231.1 KY130461_p1 helix-turn-helix DNA binding domain protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 40 351
APD19257.1 KY130461_p27 hypothetical protein phrog_948 unknown function unknown function 1 30948 31370
APD19258.1 KY130461_p28 hypothetical protein phrog_282 unknown function unknown function 1 31380 32024
APD19252.1 KY130461_p22 minor tail protein phrog_838 unknown function unknown function 1 24689 26125
APD19250.1 KY130461_p20 tail assembly chaperone phrog_21090 tail assembly chaperone tail 1 18567 19142
APD19235.1 KY130461_p5 hypothetical protein phrog_781 unknown function unknown function 1 2882 3286
APD19290.1 KY130461_p60 hypothetical protein phrog_18065 unknown function unknown function 1 47204 47395
APD19318.1 KY130461_p92 hypothetical protein phrog_17696 unknown function unknown function 1 60338 60907
APD19315.1 KY130461_p89 hypothetical protein phrog_20750 unknown function unknown function 1 59011 59634
APD19274.1 KY130461_p44 hypothetical protein phrog_549 unknown function unknown function 1 40128 40529
APD19280.1 KY130461_p50 hypothetical protein phrog_5168 unknown function unknown function 1 42204 42809
APD19282.1 KY130461_p52 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43843 44184
APD19279.1 KY130461_p49 hypothetical protein phrog_18946 unknown function unknown function 1 41899 42189
APD19294.1 KY130461_p64 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 48057 48599
APD19284.1 KY130461_p54 hypothetical protein phrog_12222 unknown function unknown function 1 44365 44931
APD19249.1 KY130461_p19 tail assembly chaperone phrog_5 tail completion or Neck1 protein connector 1 18137 18547
APD19239.1 KY130461_p9 major capsid protein phrog_777 major head protein head and packaging 1 10537 12588
APD19320.1 KY130461_p70 hypothetical protein phrog_647 unknown function unknown function 1 50486 50746
APD19317.1 KY130461_p91 hypothetical protein phrog_1933 unknown function unknown function 1 60126 60338
APD19237.1 KY130461_p7 hypothetical protein phrog_21406 unknown function unknown function 1 5199 10205
APD19265.1 KY130461_p35 hypothetical protein phrog_941 unknown function unknown function 1 35678 35962
APD19238.1 KY130461_p8 hypothetical protein phrog_2069 unknown function unknown function 1 10239 10427
APD19293.1 KY130461_p63 hypothetical protein phrog_24973 unknown function unknown function 1 47972 48064
APD19307.1 KY130461_p80 hypothetical protein phrog_19230 unknown function unknown function 1 56042 56191
APD19244.1 KY130461_p14 hypothetical protein phrog_2525 unknown function unknown function 1 14922 15254
APD19241.1 KY130461_p11 hypothetical protein phrog_14250 unknown function unknown function 1 13462 13845
APD19245.1 KY130461_p15 major tail protein phrog_792 major tail protein tail 1 15358 16464
APD19242.1 KY130461_p12 hypothetical protein phrog_2272 unknown function unknown function 1 13847 14464
APD19266.1 KY130461_p36 lysin A phrog_317 endolysin lysis 1 36026 37648
APD19308.1 KY130461_p81 hypothetical protein phrog_20126 unknown function unknown function 1 56245 56616
APD19275.1 KY130461_p45 hypothetical protein phrog_6351 unknown function unknown function 1 40526 40942
APD19316.1 KY130461_p90 hypothetical protein phrog_18180 unknown function unknown function 1 59692 60018
APD19309.1 KY130461_p82 hypothetical protein phrog_20551 unknown function unknown function 1 56613 56984
APD19311.1 KY130461_p84 hypothetical protein phrog_20646 unknown function unknown function 1 57523 57924
APD19285.1 KY130461_p55 WhiB family transcription factor phrog_9926 transcriptional regulator WhiB-like transcription regulation 1 44928 45209
APD19270.1 KY130461_p40 hypothetical protein phrog_20990 unknown function unknown function 1 39031 39354
APD19243.1 KY130461_p13 hypothetical protein phrog_2344 unknown function unknown function 1 14461 14925
APD19314.1 KY130461_p87 hypothetical protein phrog_865 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58560 58742
APD19299.1 KY130461_p71 hypothetical protein phrog_7643 unknown function unknown function 1 50743 51078
APD19271.1 KY130461_p41 hypothetical protein phrog_19173 unknown function unknown function 1 39345 39542
APD19256.1 KY130461_p26 hypothetical protein phrog_240 head protein head and packaging 1 30559 30939
APD19261.1 KY130461_p31 hypothetical protein phrog_3329 unknown function unknown function 1 32770 34092
APD19295.1 KY130461_p65 hypothetical protein phrog_2450 unknown function unknown function 1 48592 49020
APD19301.1 KY130461_p73 hypothetical protein phrog_7405 unknown function unknown function 1 52643 53527
APD19296.1 KY130461_p66 hypothetical protein singleton unknown function unknown function 1 49020 49166
APD19263.1 KY130461_p33 hypothetical protein phrog_2804 virion structural protein head and packaging 1 34531 35241
APD19302.1 KY130461_p74 hypothetical protein phrog_21464 unknown function unknown function 1 53690 54199
APD19236.1 KY130461_p6 portal protein phrog_776 portal protein head and packaging 1 3328 5202
APD19233.1 KY130461_p3 helix-turn-helix DNA binding domain protein phrog_928 unknown function unknown function 1 1974 2498
APD19259.1 KY130461_p29 hypothetical protein phrog_8248 unknown function unknown function 1 32025 32177
APD19287.1 KY130461_p57 hypothetical protein phrog_21540 unknown function unknown function 1 45942 46415
APD19292.1 KY130461_p62 hypothetical protein phrog_26094 unknown function unknown function 1 47751 47972
APD19306.1 KY130461_p79 hypothetical protein phrog_7172 unknown function unknown function 1 55806 56054