| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY130461 |
Definition |
Mycobacterium phage Taptic, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
60973 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
67.43 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APD19255.1 | KY130461_p25 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 29324 | 30529 |
| APD19253.1 | KY130461_p23 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 26126 | 27163 |
| APD19298.1 | KY130461_p69 | hypothetical protein | phrog_5429 | DNA repair protein | DNA, RNA and nucleotide metabolism | 1 | 49940 | 50446 |
| APD19322.1 | KY130461_p88 | hypothetical protein | phrog_24634 | unknown function | unknown function | 1 | 58811 | 59023 |
| APD19268.1 | KY130461_p38 | helix-turn-helix DNA binding domain protein | phrog_14639 | cro-like repressor | transcription regulation | 1 | 38403 | 38675 |
| APD19264.1 | KY130461_p34 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 35259 | 35615 |
| APD19321.1 | KY130461_p76 | hypothetical protein | phrog_24634 | unknown function | unknown function | 1 | 54819 | 55070 |
| APD19319.1 | KY130461_p68 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 49502 | 49873 |
| APD19281.1 | KY130461_p51 | DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 42806 | 43846 |
| APD19297.1 | KY130461_p67 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49153 | 49491 |
| APD19247.1 | KY130461_p17 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 17229 | 17750 |
| APD19288.1 | KY130461_p58 | hypothetical protein | phrog_20591 | unknown function | unknown function | 1 | 46455 | 46958 |
| APD19312.1 | KY130461_p85 | hypothetical protein | phrog_20036 | unknown function | unknown function | 1 | 57999 | 58310 |
| APD19310.1 | KY130461_p83 | hypothetical protein | phrog_19324 | unknown function | unknown function | 1 | 56984 | 57526 |
| APD19303.1 | KY130461_p75 | hypothetical protein | phrog_5855 | unknown function | unknown function | 1 | 54303 | 54803 |
| APD19234.1 | KY130461_p4 | hypothetical protein | phrog_21481 | unknown function | unknown function | 1 | 2536 | 2850 |
| APD19276.1 | KY130461_p46 | hypothetical protein | phrog_21720 | unknown function | unknown function | 1 | 40954 | 41139 |
| APD19304.1 | KY130461_p77 | hypothetical protein | phrog_2287 | unknown function | unknown function | 1 | 55054 | 55272 |
| APD19286.1 | KY130461_p56 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45202 | 45942 |
| APD19254.1 | KY130461_p24 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 27160 | 29289 |
| APD19313.1 | KY130461_p86 | hypothetical protein | phrog_10592 | unknown function | unknown function | 1 | 58307 | 58558 |
| APD19251.1 | KY130461_p21 | tapemeasure protein | phrog_934 | tail length tape measure protein | tail | 1 | 19168 | 24675 |
| APD19277.1 | KY130461_p47 | hypothetical protein | phrog_21184 | unknown function | unknown function | 1 | 41136 | 41552 |
| APD19273.1 | KY130461_p43 | hypothetical protein | phrog_21317 | unknown function | unknown function | 1 | 39868 | 40131 |
| APD19246.1 | KY130461_p16 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 16492 | 17229 |
| APD19240.1 | KY130461_p10 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 12673 | 13449 |
| APD19262.1 | KY130461_p32 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 34112 | 34531 |
| APD19278.1 | KY130461_p48 | hypothetical protein | phrog_9420 | unknown function | unknown function | 1 | 41540 | 41902 |
| APD19269.1 | KY130461_p39 | hypothetical protein | phrog_21783 | unknown function | unknown function | 1 | 38672 | 39040 |
| APD19305.1 | KY130461_p78 | hypothetical protein | phrog_2355 | unknown function | unknown function | 1 | 55327 | 55809 |
| APD19248.1 | KY130461_p18 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 17761 | 18147 |
| APD19272.1 | KY130461_p42 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39536 | 39757 |
| APD19232.1 | KY130461_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 348 | 1952 |
| APD19283.1 | KY130461_p53 | hypothetical protein | phrog_21460 | unknown function | unknown function | 1 | 44174 | 44368 |
| APD19291.1 | KY130461_p61 | hypothetical protein | phrog_15432 | unknown function | unknown function | 1 | 47404 | 47754 |
| APD19300.1 | KY130461_p72 | hypothetical protein | phrog_7858 | unknown function | unknown function | 1 | 51258 | 52646 |
| APD19267.1 | KY130461_p37 | holin | phrog_526 | holin | lysis | 1 | 37653 | 38162 |
| APD19289.1 | KY130461_p59 | hypothetical protein | phrog_1495 | unknown function | unknown function | 1 | 46958 | 47194 |
| APD19260.1 | KY130461_p30 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 32174 | 32773 |
| APD19231.1 | KY130461_p1 | helix-turn-helix DNA binding domain protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40 | 351 |
| APD19257.1 | KY130461_p27 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 30948 | 31370 |
| APD19258.1 | KY130461_p28 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 31380 | 32024 |
| APD19252.1 | KY130461_p22 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 24689 | 26125 |
| APD19250.1 | KY130461_p20 | tail assembly chaperone | phrog_21090 | tail assembly chaperone | tail | 1 | 18567 | 19142 |
| APD19235.1 | KY130461_p5 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 2882 | 3286 |
| APD19290.1 | KY130461_p60 | hypothetical protein | phrog_18065 | unknown function | unknown function | 1 | 47204 | 47395 |
| APD19318.1 | KY130461_p92 | hypothetical protein | phrog_17696 | unknown function | unknown function | 1 | 60338 | 60907 |
| APD19315.1 | KY130461_p89 | hypothetical protein | phrog_20750 | unknown function | unknown function | 1 | 59011 | 59634 |
| APD19274.1 | KY130461_p44 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 40128 | 40529 |
| APD19280.1 | KY130461_p50 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 42204 | 42809 |
| APD19282.1 | KY130461_p52 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43843 | 44184 |
| APD19279.1 | KY130461_p49 | hypothetical protein | phrog_18946 | unknown function | unknown function | 1 | 41899 | 42189 |
| APD19294.1 | KY130461_p64 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 48057 | 48599 |
| APD19284.1 | KY130461_p54 | hypothetical protein | phrog_12222 | unknown function | unknown function | 1 | 44365 | 44931 |
| APD19249.1 | KY130461_p19 | tail assembly chaperone | phrog_5 | tail completion or Neck1 protein | connector | 1 | 18137 | 18547 |
| APD19239.1 | KY130461_p9 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 10537 | 12588 |
| APD19320.1 | KY130461_p70 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 50486 | 50746 |
| APD19317.1 | KY130461_p91 | hypothetical protein | phrog_1933 | unknown function | unknown function | 1 | 60126 | 60338 |
| APD19237.1 | KY130461_p7 | hypothetical protein | phrog_21406 | unknown function | unknown function | 1 | 5199 | 10205 |
| APD19265.1 | KY130461_p35 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 35678 | 35962 |
| APD19238.1 | KY130461_p8 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 10239 | 10427 |
| APD19293.1 | KY130461_p63 | hypothetical protein | phrog_24973 | unknown function | unknown function | 1 | 47972 | 48064 |
| APD19307.1 | KY130461_p80 | hypothetical protein | phrog_19230 | unknown function | unknown function | 1 | 56042 | 56191 |
| APD19244.1 | KY130461_p14 | hypothetical protein | phrog_2525 | unknown function | unknown function | 1 | 14922 | 15254 |
| APD19241.1 | KY130461_p11 | hypothetical protein | phrog_14250 | unknown function | unknown function | 1 | 13462 | 13845 |
| APD19245.1 | KY130461_p15 | major tail protein | phrog_792 | major tail protein | tail | 1 | 15358 | 16464 |
| APD19242.1 | KY130461_p12 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 13847 | 14464 |
| APD19266.1 | KY130461_p36 | lysin A | phrog_317 | endolysin | lysis | 1 | 36026 | 37648 |
| APD19308.1 | KY130461_p81 | hypothetical protein | phrog_20126 | unknown function | unknown function | 1 | 56245 | 56616 |
| APD19275.1 | KY130461_p45 | hypothetical protein | phrog_6351 | unknown function | unknown function | 1 | 40526 | 40942 |
| APD19316.1 | KY130461_p90 | hypothetical protein | phrog_18180 | unknown function | unknown function | 1 | 59692 | 60018 |
| APD19309.1 | KY130461_p82 | hypothetical protein | phrog_20551 | unknown function | unknown function | 1 | 56613 | 56984 |
| APD19311.1 | KY130461_p84 | hypothetical protein | phrog_20646 | unknown function | unknown function | 1 | 57523 | 57924 |
| APD19285.1 | KY130461_p55 | WhiB family transcription factor | phrog_9926 | transcriptional regulator WhiB-like | transcription regulation | 1 | 44928 | 45209 |
| APD19270.1 | KY130461_p40 | hypothetical protein | phrog_20990 | unknown function | unknown function | 1 | 39031 | 39354 |
| APD19243.1 | KY130461_p13 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 14461 | 14925 |
| APD19314.1 | KY130461_p87 | hypothetical protein | phrog_865 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58560 | 58742 |
| APD19299.1 | KY130461_p71 | hypothetical protein | phrog_7643 | unknown function | unknown function | 1 | 50743 | 51078 |
| APD19271.1 | KY130461_p41 | hypothetical protein | phrog_19173 | unknown function | unknown function | 1 | 39345 | 39542 |
| APD19256.1 | KY130461_p26 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 30559 | 30939 |
| APD19261.1 | KY130461_p31 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 32770 | 34092 |
| APD19295.1 | KY130461_p65 | hypothetical protein | phrog_2450 | unknown function | unknown function | 1 | 48592 | 49020 |
| APD19301.1 | KY130461_p73 | hypothetical protein | phrog_7405 | unknown function | unknown function | 1 | 52643 | 53527 |
| APD19296.1 | KY130461_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49020 | 49166 |
| APD19263.1 | KY130461_p33 | hypothetical protein | phrog_2804 | virion structural protein | head and packaging | 1 | 34531 | 35241 |
| APD19302.1 | KY130461_p74 | hypothetical protein | phrog_21464 | unknown function | unknown function | 1 | 53690 | 54199 |
| APD19236.1 | KY130461_p6 | portal protein | phrog_776 | portal protein | head and packaging | 1 | 3328 | 5202 |
| APD19233.1 | KY130461_p3 | helix-turn-helix DNA binding domain protein | phrog_928 | unknown function | unknown function | 1 | 1974 | 2498 |
| APD19259.1 | KY130461_p29 | hypothetical protein | phrog_8248 | unknown function | unknown function | 1 | 32025 | 32177 |
| APD19287.1 | KY130461_p57 | hypothetical protein | phrog_21540 | unknown function | unknown function | 1 | 45942 | 46415 |
| APD19292.1 | KY130461_p62 | hypothetical protein | phrog_26094 | unknown function | unknown function | 1 | 47751 | 47972 |
| APD19306.1 | KY130461_p79 | hypothetical protein | phrog_7172 | unknown function | unknown function | 1 | 55806 | 56054 |