Genomic map of Pasteurella phage PMP-GADVASU-IND (KY203335)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY203335
Definition
Pasteurella phage PMP-GADVASU-IND, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
46335
Host Name
Pasteurella multocida
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
53.39
Number of singletons
27
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APQ42464.1 KY203335_p24 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 12083 13432
APQ42489.1 KY203335_p49 hypothetical protein singleton unknown function unknown function 1 35378 36811
APQ42456.1 KY203335_p16 PD-(D/E)XK nuclease superfamily protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 5157 6629
APQ42478.1 KY203335_p38 hypothetical protein phrog_8079 neck protein connector 1 24178 24492
APQ42490.1 KY203335_p50 hypothetical protein singleton unknown function unknown function 1 36858 37151
APQ42477.1 KY203335_p37 hypothetical protein phrog_763 head-tail adaptor connector 1 23846 24178
APQ42449.1 KY203335_p9 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 2856 3287
APQ42448.1 KY203335_p8 hypothetical protein singleton unknown function unknown function 1 2692 2856
APQ42465.1 KY203335_p25 hypothetical protein phrog_12885 unknown function unknown function 1 13438 14091
APQ42463.1 KY203335_p23 VRR-NUC domain protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 11821 12102
APQ42480.1 KY203335_p40 hypothetical protein phrog_117 major tail protein tail 1 24885 25526
APQ42455.1 KY203335_p15 hypothetical protein singleton unknown function unknown function 1 4701 5156
APQ42474.1 KY203335_p34 hypothetical protein phrog_1650 major head protein head and packaging 1 21987 22952
APQ42469.1 KY203335_p29 hypothetical protein singleton unknown function unknown function 1 16906 17196
APQ42470.1 KY203335_p30 terminase phrog_9 terminase large subunit head and packaging 1 17193 18836
APQ42502.1 KY203335_p62 hypothetical protein phrog_18815 unknown function unknown function -1 44203 44748
APQ42500.1 KY203335_p60 hypothetical protein singleton unknown function unknown function -1 43279 43839
APQ42485.1 KY203335_p45 hypothetical protein phrog_106 minor tail protein tail 1 31278 32132
APQ42473.1 KY203335_p33 hypothetical protein phrog_20430 unknown function unknown function 1 21588 21959
APQ42446.1 KY203335_p6 hypothetical protein singleton unknown function unknown function 1 2149 2385
APQ42491.1 KY203335_p51 hypothetical protein singleton unknown function unknown function 1 37286 37393
APQ42486.1 KY203335_p46 hypothetical protein phrog_110 minor tail protein tail 1 32137 33762
APQ42460.1 KY203335_p20 hypothetical protein phrog_21138 unknown function unknown function 1 7524 8126
APQ42481.1 KY203335_p41 hypothetical protein singleton unknown function unknown function 1 25545 25649
APQ42498.1 KY203335_p58 integrase phrog_1 integrase integration and excision -1 41328 42536
APQ42497.1 KY203335_p57 NUMOD4 motif protein phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism -1 40475 41050
APQ42495.1 KY203335_p55 hypothetical protein phrog_4026 minor tail protein tail 1 39558 39971
APQ42457.1 KY203335_p17 hypothetical protein singleton unknown function unknown function 1 6700 7020
APQ42450.1 KY203335_p10 hypothetical protein singleton unknown function unknown function 1 3356 3481
APQ42483.1 KY203335_p43 hypothetical protein phrog_24583 unknown function unknown function 1 26217 26564
APQ42444.1 KY203335_p4 helix-turn-helix domain protein singleton unknown function unknown function 1 1771 1953
APQ42447.1 KY203335_p7 hypothetical protein singleton unknown function unknown function 1 2386 2583
APQ42443.1 KY203335_p3 hypothetical protein phrog_2340 endonuclease DNA, RNA and nucleotide metabolism 1 1220 1753
APQ42484.1 KY203335_p44 hypothetical protein phrog_8927 tail length tape measure protein tail 1 26568 31277
APQ42461.1 KY203335_p21 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8232 8876
APQ42505.1 KY203335_p65 hypothetical protein singleton unknown function unknown function 1 45914 46192
APQ42499.1 KY203335_p59 hypothetical protein singleton unknown function unknown function -1 42639 43241
APQ42472.1 KY203335_p32 ATP-dependent Clp protease proteolytic subunit 1 phrog_2976 head maturation protease head and packaging 1 20146 21573
APQ42492.1 KY203335_p52 NUMOD4 motif protein phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37495 38190
APQ42476.1 KY203335_p36 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 23376 23843
APQ42441.1 KY203335_p1 hypothetical protein singleton unknown function unknown function 1 2 217
APQ42493.1 KY203335_p53 N-acetylmuramoyl-L-alanine amidase phrog_14048 endolysin lysis 1 38265 39185
APQ42442.1 KY203335_p2 hypothetical protein phrog_36180 unknown function unknown function 1 714 1223
APQ42494.1 KY203335_p54 hypothetical protein phrog_3428 holin lysis 1 39186 39545
APQ42453.1 KY203335_p13 hypothetical protein singleton unknown function unknown function 1 4303 4524
APQ42468.1 KY203335_p28 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16595 16912
APQ42454.1 KY203335_p14 hypothetical protein singleton unknown function unknown function 1 4524 4691
APQ42459.1 KY203335_p19 hypothetical protein singleton unknown function unknown function 1 7293 7511
APQ42479.1 KY203335_p39 hypothetical protein singleton unknown function unknown function 1 24492 24884
APQ42503.1 KY203335_p63 hypothetical protein singleton unknown function unknown function 1 44845 45093
APQ42445.1 KY203335_p5 hypothetical protein singleton unknown function unknown function 1 2028 2198
APQ42501.1 KY203335_p61 hypothetical protein phrog_87 metallo-protease other -1 43836 44210
APQ42452.1 KY203335_p12 hypothetical protein singleton unknown function unknown function 1 3913 4137
APQ42496.1 KY203335_p56 hypothetical protein phrog_24256 unknown function unknown function 1 39984 40412
APQ42504.1 KY203335_p64 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 45123 45917
APQ42471.1 KY203335_p31 hypothetical protein phrog_113 portal protein head and packaging 1 18833 20158
APQ42466.1 KY203335_p26 hypothetical protein phrog_22117 unknown function unknown function 1 14802 15056
APQ42451.1 KY203335_p11 hypothetical protein singleton unknown function unknown function 1 3482 3916
APQ42487.1 KY203335_p47 hypothetical protein phrog_8122 minor tail protein tail 1 33769 34347
APQ42458.1 KY203335_p18 hypothetical protein singleton unknown function unknown function 1 7017 7178
APQ42475.1 KY203335_p35 hypothetical protein singleton unknown function unknown function 1 22962 23351
APQ42467.1 KY203335_p27 HNH endonuclease phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 15779 16453
APQ42482.1 KY203335_p42 hypothetical protein singleton unknown function unknown function 1 25813 26157
APQ42488.1 KY203335_p48 hypothetical protein phrog_16352 unknown function unknown function 1 34337 35365
APQ42462.1 KY203335_p22 virulence-associated protein E phrog_256 DNA helicase DNA, RNA and nucleotide metabolism 1 9023 11551