Genomic map of Mycobacterium phage Petruchio (KY213952)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY213952
Definition
Mycobacterium phage Petruchio, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
49531
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
63.82
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APQ41844.1 KY213952_p58 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39234 39710
APQ41833.1 KY213952_p46 hypothetical protein phrog_1781 unknown function unknown function -1 34838 35068
APQ41834.1 KY213952_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35099 35590
APQ41857.1 KY213952_p71 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43230 44066
APQ41794.1 KY213952_p6 hypothetical protein phrog_553 minor tail protein tail 1 3029 3739
APQ41827.1 KY213952_p39 hypothetical protein phrog_1966 unknown function unknown function -1 31298 31567
APQ41829.1 KY213952_p42 hypothetical protein phrog_1971 unknown function unknown function -1 31823 32089
APQ41811.1 KY213952_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15516 16315
APQ41805.1 KY213952_p17 head-tail connector phrog_137 head-tail adaptor Ad1 connector 1 12878 13327
APQ41826.1 KY213952_p38 integrase phrog_95 integrase integration and excision 1 29593 31176
APQ41858.1 KY213952_p72 hypothetical protein phrog_13709 unknown function unknown function -1 44045 44260
APQ41814.1 KY213952_p26 minor tail protein phrog_106 minor tail protein tail 1 19316 21373
APQ41822.1 KY213952_p34 hypothetical protein phrog_644 unknown function unknown function 1 27927 28247
APQ41841.1 KY213952_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38087 38665
APQ41816.1 KY213952_p28 minor tail protein phrog_110 minor tail protein tail 1 21511 23313
APQ41871.1 KY213952_p85 hypothetical protein phrog_15443 unknown function unknown function -1 47959 48204
APQ41808.1 KY213952_p20 head-tail connector phrog_123 tail terminator connector 1 14088 14534
APQ41798.1 KY213952_p10 lysin B phrog_102 endolysin lysis 1 5701 6669
APQ41876.1 KY213952_p90 hypothetical protein phrog_21178 unknown function unknown function -1 49124 49486
APQ41879.1 KY213952_p41 hypothetical protein phrog_1860 unknown function unknown function -1 31731 31826
APQ41843.1 KY213952_p57 hypothetical protein phrog_397 unknown function unknown function -1 39103 39237
APQ41835.1 KY213952_p48 hypothetical protein phrog_499 unknown function unknown function -1 35587 35769
APQ41846.1 KY213952_p60 hypothetical protein phrog_1546 unknown function unknown function -1 39780 40166
APQ41790.1 KY213952_p1 hypothetical protein phrog_31705 unknown function unknown function 1 609 749
APQ41852.1 KY213952_p66 hypothetical protein phrog_2507 unknown function unknown function -1 41908 42081
APQ41863.1 KY213952_p77 hypothetical protein phrog_8497 unknown function unknown function -1 46080 46247
APQ41838.1 KY213952_p51 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36695 37462
APQ41866.1 KY213952_p80 hypothetical protein phrog_1387 unknown function unknown function -1 46671 46874
APQ41849.1 KY213952_p63 DnaB-like replicative helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40710 41531
APQ41853.1 KY213952_p67 hypothetical protein phrog_1705 unknown function unknown function -1 42078 42200
APQ41804.1 KY213952_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12360 12878
APQ41795.1 KY213952_p7 hypothetical protein phrog_1718 tail protein tail 1 3753 4013
APQ41856.1 KY213952_p70 DNA binding domain protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43021 43203
APQ41837.1 KY213952_p50 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36550 36690
APQ41875.1 KY213952_p89 hypothetical protein phrog_14103 unknown function unknown function -1 48797 49033
APQ41815.1 KY213952_p27 hypothetical protein phrog_1543 minor tail protein tail 1 21392 21511
APQ41796.1 KY213952_p8 hypothetical protein phrog_747 unknown function unknown function 1 4021 4278
APQ41848.1 KY213952_p62 NRDH glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40435 40710
APQ41854.1 KY213952_p68 HTH DNA binding domain protein phrog_520 unknown function unknown function -1 42197 42490
APQ41850.1 KY213952_p64 hypothetical protein phrog_5323 unknown function unknown function -1 41535 41744
APQ41862.1 KY213952_p76 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 45788 46087
APQ41878.1 KY213952_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38454 38969
APQ41847.1 KY213952_p61 hypothetical protein phrog_722 unknown function unknown function -1 40163 40438
APQ41793.1 KY213952_p5 tail protein phrog_1197 tail protein tail 1 1949 3019
APQ41874.1 KY213952_p88 hypothetical protein phrog_828 unknown function unknown function -1 48515 48718
APQ41828.1 KY213952_p40 hypothetical protein phrog_2035 unknown function unknown function -1 31564 31734
APQ41868.1 KY213952_p82 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 47059 47226
APQ41830.1 KY213952_p43 hypothetical protein phrog_383 unknown function unknown function -1 32086 32448
APQ41803.1 KY213952_p15 major capsid protein phrog_10 major head protein head and packaging 1 11274 12281
APQ41825.1 KY213952_p37 hypothetical protein phrog_411 unknown function unknown function 1 29238 29522
APQ41809.1 KY213952_p21 major tail protein phrog_117 major tail protein tail 1 14543 15394
APQ41867.1 KY213952_p81 hypothetical protein phrog_1155 unknown function unknown function -1 46871 47059
APQ41842.1 KY213952_p56 hypothetical protein phrog_1783 unknown function unknown function -1 38948 39106
APQ41806.1 KY213952_p18 head-tail connector phrog_320 head closure Hc1 connector 1 13327 13689
APQ41821.1 KY213952_p33 D-ala D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 26356 27834
APQ41864.1 KY213952_p78 hypothetical protein phrog_1720 unknown function unknown function -1 46244 46510
APQ41839.1 KY213952_p52 hypothetical protein phrog_1503 unknown function unknown function -1 37459 37638
APQ41832.1 KY213952_p45 DNA polymerase 1 phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32972 34801
APQ41791.1 KY213952_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 749 1045
APQ41819.1 KY213952_p31 hypothetical protein phrog_1397 unknown function unknown function 1 24138 24485
APQ41851.1 KY213952_p65 hypothetical protein phrog_2864 unknown function unknown function -1 41741 41908
APQ41818.1 KY213952_p30 hypothetical protein phrog_981 minor tail protein tail 1 23794 24141
APQ41813.1 KY213952_p25 HNH endonuclease phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 18798 19292
APQ41792.1 KY213952_p3 terminase small subunit phrog_226 minor tail protein tail 1 1080 1514
APQ41810.1 KY213952_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15516 15893
APQ41870.1 KY213952_p84 hypothetical protein singleton unknown function unknown function -1 47531 47854
APQ41817.1 KY213952_p29 hypothetical protein phrog_352 minor tail protein tail 1 23351 23797
APQ41799.1 KY213952_p11 terminase large subunit phrog_9 terminase large subunit head and packaging 1 6689 8377
APQ41812.1 KY213952_p24 tape measure phrog_305 tail length tape measure protein tail 1 16327 18795
APQ41823.1 KY213952_p35 hypothetical protein phrog_1560 unknown function unknown function 1 28257 28448
APQ41820.1 KY213952_p32 minor tail protein phrog_346 minor tail protein tail 1 24510 26363
APQ41801.1 KY213952_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9813 10694
APQ41877.1 KY213952_p4 hypothetical protein phrog_7087 unknown function unknown function 1 1593 1883
APQ41865.1 KY213952_p79 hypothetical protein phrog_26170 unknown function unknown function -1 46507 46650
APQ41873.1 KY213952_p87 hypothetical protein phrog_33090 unknown function unknown function -1 48312 48518
APQ41869.1 KY213952_p83 hypothetical protein phrog_722 unknown function unknown function -1 47223 47510
APQ41802.1 KY213952_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10752 11264
APQ41831.1 KY213952_p44 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 32471 32947
APQ41840.1 KY213952_p53 hypothetical protein phrog_474 phosphofructokinase other -1 37635 38090
APQ41872.1 KY213952_p86 hypothetical protein phrog_2212 unknown function unknown function -1 48224 48307
APQ41836.1 KY213952_p49 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35766 36557
APQ41860.1 KY213952_p74 hypothetical protein phrog_1809 unknown function unknown function -1 44577 44972
APQ41807.1 KY213952_p19 head-tail connector phrog_321 tail completion or Neck1 protein connector 1 13689 14084
APQ41845.1 KY213952_p59 hypothetical protein phrog_1019 unknown function unknown function -1 39697 39783
APQ41855.1 KY213952_p69 hypothetical protein phrog_2184 unknown function unknown function -1 42487 43017
APQ41859.1 KY213952_p73 hypothetical protein phrog_1584 unknown function unknown function -1 44257 44580
APQ41824.1 KY213952_p36 hypothetical protein phrog_12500 minor tail protein tail 1 28445 28990
APQ41800.1 KY213952_p12 portal protein phrog_104 portal protein head and packaging 1 8374 9816
APQ41861.1 KY213952_p75 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45014 45700
APQ41797.1 KY213952_p9 lysin A phrog_317 endolysin lysis 1 4278 5711