| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KY224001 |
Definition |
Mycobacterium phage Blue, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
50864 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
84 |
%GC |
63.93 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APQ42418.1 | KY224001_p66 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43242 | 43535 |
| APQ42361.1 | KY224001_p5 | minor tail protein | phrog_1197 | tail protein | tail | 1 | 2383 | 3453 |
| APQ42395.1 | KY224001_p39 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 31831 | 32220 |
| APQ42376.1 | KY224001_p20 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 14224 | 14670 |
| APQ42357.1 | KY224001_p1 | G-I-Y Y-I-G endonuclease | phrog_17889 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 538 | 1011 |
| APQ42402.1 | KY224001_p46 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 35129 | 35329 |
| APQ42382.1 | KY224001_p26 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 21403 | 21585 |
| APQ42374.1 | KY224001_p18 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 13463 | 13825 |
| APQ42411.1 | KY224001_p58 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 40419 | 40895 |
| APQ42368.1 | KY224001_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8797 | 10239 |
| APQ42437.1 | KY224001_p55 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39639 | 40154 |
| APQ42426.1 | KY224001_p74 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 46712 | 46981 |
| APQ42379.1 | KY224001_p22 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15654 | 16456 |
| APQ42417.1 | KY224001_p64 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 42848 | 42979 |
| APQ42420.1 | KY224001_p68 | DNA binding domain protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 43856 | 44038 |
| APQ42404.1 | KY224001_p48 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35878 | 36063 |
| APQ42414.1 | KY224001_p61 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 41588 | 41818 |
| APQ42439.1 | KY224001_p56 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 40133 | 40291 |
| APQ42415.1 | KY224001_p62 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41854 | 42675 |
| APQ42390.1 | KY224001_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28331 | 28522 |
| APQ42405.1 | KY224001_p49 | HTH DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36060 | 36851 |
| APQ42431.1 | KY224001_p79 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 47679 | 47828 |
| APQ42387.1 | KY224001_p31 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24584 | 26437 |
| APQ42409.1 | KY224001_p53 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 38880 | 39272 |
| APQ42429.1 | KY224001_p77 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47366 | 47533 |
| APQ42388.1 | KY224001_p32 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26430 | 27908 |
| APQ42422.1 | KY224001_p70 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 44882 | 45208 |
| APQ42375.1 | KY224001_p19 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13825 | 14220 |
| APQ42425.1 | KY224001_p73 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46416 | 46715 |
| APQ42369.1 | KY224001_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10236 | 11117 |
| APQ42392.1 | KY224001_p36 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29443 | 29727 |
| APQ42372.1 | KY224001_p16 | head-to-tail connector protein | phrog_1857 | head-tail connector protein | connector | 1 | 12778 | 13014 |
| APQ42435.1 | KY224001_p83 | hypothetical protein | phrog_5542 | unknown function | unknown function | -1 | 49700 | 50020 |
| APQ42389.1 | KY224001_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27995 | 28321 |
| APQ42391.1 | KY224001_p35 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28519 | 29322 |
| APQ42440.1 | KY224001_p65 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 42976 | 43245 |
| APQ42432.1 | KY224001_p80 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 48305 | 48982 |
| APQ42421.1 | KY224001_p69 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44065 | 44889 |
| APQ42398.1 | KY224001_p42 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32476 | 32763 |
| APQ42384.1 | KY224001_p28 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 23425 | 23871 |
| APQ42407.1 | KY224001_p51 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 36989 | 38707 |
| APQ42438.1 | KY224001_p57 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 40288 | 40422 |
| APQ42400.1 | KY224001_p44 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33140 | 34966 |
| APQ42436.1 | KY224001_p84 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 50220 | 50474 |
| APQ42386.1 | KY224001_p30 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 24212 | 24559 |
| APQ42430.1 | KY224001_p78 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 47530 | 47658 |
| APQ42371.1 | KY224001_p15 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11698 | 12699 |
| APQ42401.1 | KY224001_p45 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 35007 | 35132 |
| APQ42363.1 | KY224001_p7 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 4178 | 4438 |
| APQ42366.1 | KY224001_p10 | lysin B | phrog_102 | endolysin | lysis | 1 | 6124 | 7092 |
| APQ42396.1 | KY224001_p40 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 32217 | 32387 |
| APQ42399.1 | KY224001_p43 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32760 | 33143 |
| APQ42393.1 | KY224001_p37 | integrase | phrog_95 | integrase | integration and excision | 1 | 29798 | 31393 |
| APQ42358.1 | KY224001_p2 | hypothetical protein | phrog_20581 | unknown function | unknown function | 1 | 1059 | 1235 |
| APQ42406.1 | KY224001_p50 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36844 | 36984 |
| APQ42380.1 | KY224001_p24 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16469 | 19303 |
| APQ42359.1 | KY224001_p3 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1232 | 1528 |
| APQ42433.1 | KY224001_p81 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 49047 | 49331 |
| APQ42365.1 | KY224001_p9 | lysin A | phrog_317 | endolysin | lysis | 1 | 4713 | 6134 |
| APQ42408.1 | KY224001_p52 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 38704 | 38883 |
| APQ42427.1 | KY224001_p75 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 46978 | 47181 |
| APQ42403.1 | KY224001_p47 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35390 | 35881 |
| APQ42364.1 | KY224001_p8 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4446 | 4703 |
| APQ42367.1 | KY224001_p11 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7112 | 8800 |
| APQ42419.1 | KY224001_p67 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 43532 | 43852 |
| APQ42410.1 | KY224001_p54 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39269 | 39850 |
| APQ42381.1 | KY224001_p25 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19327 | 21384 |
| APQ42362.1 | KY224001_p6 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3463 | 4164 |
| APQ42383.1 | KY224001_p27 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21585 | 23387 |
| APQ42423.1 | KY224001_p71 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 45205 | 45600 |
| APQ42394.1 | KY224001_p38 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31469 | 31834 |
| APQ42428.1 | KY224001_p76 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 47178 | 47366 |
| APQ42373.1 | KY224001_p17 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13014 | 13463 |
| APQ42397.1 | KY224001_p41 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 32384 | 32479 |
| APQ42385.1 | KY224001_p29 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 23883 | 24215 |
| APQ42424.1 | KY224001_p72 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45642 | 46154 |
| APQ42413.1 | KY224001_p60 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 41178 | 41591 |
| APQ42412.1 | KY224001_p59 | hypothetical protein | phrog_2740 | unknown function | unknown function | -1 | 41003 | 41185 |
| APQ42378.1 | KY224001_p23 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15654 | 16040 |
| APQ42360.1 | KY224001_p4 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 1563 | 1997 |
| APQ42416.1 | KY224001_p63 | hypothetical protein | phrog_2507 | unknown function | unknown function | -1 | 42675 | 42851 |
| APQ42434.1 | KY224001_p82 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49512 | 49700 |
| APQ42370.1 | KY224001_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11176 | 11688 |
| APQ42377.1 | KY224001_p21 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 14679 | 15530 |