Genomic map of Mycobacterium phage Blue (KY224001)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KY224001
Definition
Mycobacterium phage Blue, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
50864
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
63.93
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APQ42418.1 KY224001_p66 hypothetical protein phrog_520 unknown function unknown function -1 43242 43535
APQ42361.1 KY224001_p5 minor tail protein phrog_1197 tail protein tail 1 2383 3453
APQ42395.1 KY224001_p39 hypothetical protein phrog_2387 nucleotide kinase other -1 31831 32220
APQ42376.1 KY224001_p20 head-to-tail connector protein phrog_123 tail terminator connector 1 14224 14670
APQ42357.1 KY224001_p1 G-I-Y Y-I-G endonuclease phrog_17889 endonuclease DNA, RNA and nucleotide metabolism 1 538 1011
APQ42402.1 KY224001_p46 hypothetical protein phrog_1781 unknown function unknown function -1 35129 35329
APQ42382.1 KY224001_p26 minor tail protein phrog_1543 minor tail protein tail 1 21403 21585
APQ42374.1 KY224001_p18 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 13463 13825
APQ42411.1 KY224001_p58 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40419 40895
APQ42368.1 KY224001_p12 portal protein phrog_104 portal protein head and packaging 1 8797 10239
APQ42437.1 KY224001_p55 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39639 40154
APQ42426.1 KY224001_p74 hypothetical protein phrog_1720 unknown function unknown function -1 46712 46981
APQ42379.1 KY224001_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15654 16456
APQ42417.1 KY224001_p64 hypothetical protein phrog_1705 unknown function unknown function -1 42848 42979
APQ42420.1 KY224001_p68 DNA binding domain protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43856 44038
APQ42404.1 KY224001_p48 hypothetical protein phrog_499 unknown function unknown function -1 35878 36063
APQ42414.1 KY224001_p61 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 41588 41818
APQ42439.1 KY224001_p56 hypothetical protein phrog_1783 unknown function unknown function -1 40133 40291
APQ42415.1 KY224001_p62 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41854 42675
APQ42390.1 KY224001_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28331 28522
APQ42405.1 KY224001_p49 HTH DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 36060 36851
APQ42431.1 KY224001_p79 hypothetical protein phrog_932 unknown function unknown function -1 47679 47828
APQ42387.1 KY224001_p31 minor tail protein phrog_346 minor tail protein tail 1 24584 26437
APQ42409.1 KY224001_p53 hypothetical protein phrog_474 phosphofructokinase other -1 38880 39272
APQ42429.1 KY224001_p77 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 47366 47533
APQ42388.1 KY224001_p32 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26430 27908
APQ42422.1 KY224001_p70 hypothetical protein phrog_1584 unknown function unknown function -1 44882 45208
APQ42375.1 KY224001_p19 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 13825 14220
APQ42425.1 KY224001_p73 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46416 46715
APQ42369.1 KY224001_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10236 11117
APQ42392.1 KY224001_p36 hypothetical protein phrog_411 unknown function unknown function 1 29443 29727
APQ42372.1 KY224001_p16 head-to-tail connector protein phrog_1857 head-tail connector protein connector 1 12778 13014
APQ42435.1 KY224001_p83 hypothetical protein phrog_5542 unknown function unknown function -1 49700 50020
APQ42389.1 KY224001_p33 hypothetical protein phrog_644 unknown function unknown function 1 27995 28321
APQ42391.1 KY224001_p35 hypothetical protein phrog_754 minor tail protein tail 1 28519 29322
APQ42440.1 KY224001_p65 hypothetical protein phrog_780 unknown function unknown function -1 42976 43245
APQ42432.1 KY224001_p80 DNA methylase phrog_363 DNA methyltransferase other -1 48305 48982
APQ42421.1 KY224001_p69 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44065 44889
APQ42398.1 KY224001_p42 hypothetical protein phrog_1971 unknown function unknown function -1 32476 32763
APQ42384.1 KY224001_p28 minor tail protein phrog_352 minor tail protein tail 1 23425 23871
APQ42407.1 KY224001_p51 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36989 38707
APQ42438.1 KY224001_p57 hypothetical protein phrog_397 unknown function unknown function -1 40288 40422
APQ42400.1 KY224001_p44 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33140 34966
APQ42436.1 KY224001_p84 hypothetical protein phrog_5419 unknown function unknown function -1 50220 50474
APQ42386.1 KY224001_p30 minor tail protein phrog_1397 unknown function unknown function 1 24212 24559
APQ42430.1 KY224001_p78 hypothetical protein phrog_2093 unknown function unknown function -1 47530 47658
APQ42371.1 KY224001_p15 major capsid protein phrog_10 major head protein head and packaging 1 11698 12699
APQ42401.1 KY224001_p45 hypothetical protein phrog_542 unknown function unknown function -1 35007 35132
APQ42363.1 KY224001_p7 hypothetical protein phrog_1718 tail protein tail 1 4178 4438
APQ42366.1 KY224001_p10 lysin B phrog_102 endolysin lysis 1 6124 7092
APQ42396.1 KY224001_p40 hypothetical protein phrog_2035 unknown function unknown function -1 32217 32387
APQ42399.1 KY224001_p43 hypothetical protein phrog_383 unknown function unknown function -1 32760 33143
APQ42393.1 KY224001_p37 integrase phrog_95 integrase integration and excision 1 29798 31393
APQ42358.1 KY224001_p2 hypothetical protein phrog_20581 unknown function unknown function 1 1059 1235
APQ42406.1 KY224001_p50 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36844 36984
APQ42380.1 KY224001_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 16469 19303
APQ42359.1 KY224001_p3 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1232 1528
APQ42433.1 KY224001_p81 hypothetical protein phrog_3414 unknown function unknown function -1 49047 49331
APQ42365.1 KY224001_p9 lysin A phrog_317 endolysin lysis 1 4713 6134
APQ42408.1 KY224001_p52 hypothetical protein phrog_1503 unknown function unknown function -1 38704 38883
APQ42427.1 KY224001_p75 hypothetical protein phrog_1387 unknown function unknown function -1 46978 47181
APQ42403.1 KY224001_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35390 35881
APQ42364.1 KY224001_p8 hypothetical protein phrog_747 unknown function unknown function 1 4446 4703
APQ42367.1 KY224001_p11 terminase phrog_9 terminase large subunit head and packaging 1 7112 8800
APQ42419.1 KY224001_p67 hypothetical protein phrog_2184 unknown function unknown function -1 43532 43852
APQ42410.1 KY224001_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39269 39850
APQ42381.1 KY224001_p25 minor tail protein phrog_106 minor tail protein tail 1 19327 21384
APQ42362.1 KY224001_p6 hypothetical protein phrog_553 minor tail protein tail 1 3463 4164
APQ42383.1 KY224001_p27 minor tail protein phrog_110 minor tail protein tail 1 21585 23387
APQ42423.1 KY224001_p71 hypothetical protein phrog_1809 unknown function unknown function -1 45205 45600
APQ42394.1 KY224001_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31469 31834
APQ42428.1 KY224001_p76 hypothetical protein phrog_1155 unknown function unknown function -1 47178 47366
APQ42373.1 KY224001_p17 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 13014 13463
APQ42397.1 KY224001_p41 hypothetical protein phrog_1860 unknown function unknown function -1 32384 32479
APQ42385.1 KY224001_p29 minor tail protein phrog_981 minor tail protein tail 1 23883 24215
APQ42424.1 KY224001_p72 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45642 46154
APQ42413.1 KY224001_p60 hypothetical protein phrog_1573 DNA methyltransferase other -1 41178 41591
APQ42412.1 KY224001_p59 hypothetical protein phrog_2740 unknown function unknown function -1 41003 41185
APQ42378.1 KY224001_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15654 16040
APQ42360.1 KY224001_p4 terminase small subunit phrog_226 minor tail protein tail 1 1563 1997
APQ42416.1 KY224001_p63 hypothetical protein phrog_2507 unknown function unknown function -1 42675 42851
APQ42434.1 KY224001_p82 hypothetical protein phrog_1387 unknown function unknown function -1 49512 49700
APQ42370.1 KY224001_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11176 11688
APQ42377.1 KY224001_p21 major tail subunit phrog_117 major tail protein tail 1 14679 15530